Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00910 ATGTCAAGGGCTCTTGATACCATTAAGTCTGTCAATGATTCGAAGGAACTATGGAAACTTGGTGTTAGGCTTGAAGACATTTGGACTGTCACTAACCAAGGAAAAGAACATTTGGAATTTATTATTTTGGACAAACAGGGTGACCAGATCCAGGTTCTCTTGCCCTCTGATGTGACCGCTTTGTGGAAATCTACCTTAGTTGAAGGAGAAACTTATGTCATGAAAAACTTCAAAGTTCATGACAACAACTTTGCTGTTAAGTATTGTCTTCACCCTTTTAAGTTACAATTTGTTGGAGGTGAAGGAGGATCCAACATCACAAAACAGGATATACCTGATATCCCTCTCTACAAGCTTCACTTTAAGCCAATTCCTGAAATTTTGAATGGACAATTTCGCAGTGATATTTTAGTTGACATTATTGGAGCTGTTGACGATATCAAACCGCCTAAGACAAGTAATGTTGGAAAAAAACAACCTGCGAGATTCTGTTTAAAAGATGCAGCTATGAATATGGTACCATGCACTTTATGGGGTAATTTTGCATCCGACTTCATGACTTTTTACAATGCAAAGTCTGATGATAGCCCAATGATTATTATAATCAAACATGCTCAAATTAAAGAACCCCAAGGTCAATATGATTTAACTGTCTCTAATGCTTGGTCTGGAAGCAAGCTCATTTTGGATCCTAATACAAAGGAAATCATGGAATTTGCTGCAAGTTTGCCAAACAACTTCACAGCTCCAACCCTTGCTGTTTCACAAACATTGTCTGGGAATGTCAATTCCTCACAAAACTCTCAAGTCTCTCAGTATTCGATTGCCTCTCGATACACCTATCTTGCACCACCTAAACAACTTTCTGAACTAATGACATGTGCTGAGGATCAAGTTGTGACTACTGTTGGAACCACACACCATGTTATGACCTCCAAACATGGTTGGTTCTACTTGGTATGTGGCCACTGTAACAAACAAGTCATCACTTCCTCTCCTCCATATAAATGCCAAGCTGAACATGTGACCGTTGATCCACTAATCAAATACAAGGTTGAGGTAGAAGTCCGTTACCAAGACCACAAGGCACGGTTCCTTTTCTGA 1104 0.394 MSRALDTIKSVNDSKELWKLGVRLEDIWTVTNQGKEHLEFIILDKQGDQIQVLLPSDVTALWKSTLVEGETYVMKNFKVHDNNFAVKYCLHPFKLQFVGGEGGSNITKQDIPDIPLYKLHFKPIPEILNGQFRSDILVDIIGAVDDIKPPKTSNVGKKQPARFCLKDAAMNMVPCTLWGNFASDFMTFYNAKSDDSPMIIIIKHAQIKEPQGQYDLTVSNAWSGSKLILDPNTKEIMEFAASLPNNFTAPTLAVSQTLSGNVNSSQNSQVSQYSIASRYTYLAPPKQLSELMTCAEDQVVTTVGTTHHVMTSKHGWFYLVCGHCNKQVITSSPPYKCQAEHVTVDPLIKYKVEVEVRYQDHKARFLF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00910 367 Gene3D - 112 250 IPR012340 -
Trre14g00910 367 CDD RPA1_DBD_A_like 19 100 - -
Trre14g00910 367 SUPERFAMILY Nucleic acid-binding proteins 119 248 IPR012340 -
Trre14g00910 367 Gene3D - 3 101 IPR012340 -
Trre14g00910 367 Gene3D - 265 367 IPR012340 -
Trre14g00910 367 CDD RPA1_DBD_B_like 139 244 - -
Trre14g00910 367 SUPERFAMILY Nucleic acid-binding proteins 6 98 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00910 Trre-Chr14 7743995 7745692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00910 5 239 Core DNA Replication Machinery Family AT5G45400 24.696 3.04e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00910 - - tpra:123884216 276.174