Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00899 ATGTCTTATCTCTTTTTCCTACTCCTAAAGCTACAAATCTTTCTCATATTTTCTTCTCAATCTCTTTCCTTAAACACTGAACTTGACACATTAATTGCCATCAAACACTCTTTAGACCCAGAAAACCATGTCTTAATATCATGGAACATTCATTCTGATCCATGTAGTGGAACTTTTGAAGGTGTGGCTTGTAATGAACAAGGTCTTGTTACTAATATTTCACTTCAAGGAAAAGGTTTATCTGGTAAATTACCATCAGTGATTGGTAATCTTAAGAGTTTAACTGGTCTTTATCTTCATTTCAATGCCTTAAATGGGAATTTACCTAAGGAAATTGCAGGATTAACTCAGCTTAGTGATTTGTATCTTAATGTTAATAATTTCTCTGGTTTTATCCCTCATGAGATTGGTAACATGTCAAATCTTCAAGTTTTACAGCTTTGTTATAATGAGCTTAATGGAAGTATACCAACTGAGCTAGGAAAATTAAAGCAGCTAAGCGTTCTTGCGCTCCAATATAATCACTTCAGTGGCGCGATTCCTGCAAGTTTGGGTGAGCTAGAGACACTAGAAAGATTGGATCTCAGCTTCAATACTCTTTTTGGTCCACTTCCAGTGACATTAACTTATCCACCTAAACTACAGACTCTCGATATTCGAAACAATTCACTCTCTGGCAGTGTCCCTACAGCGCTGCAAAGACTAAAAGGAGGGTTACAGTATTCTAACAATCATGGTTTATGTGGAACTGGATTTGCCGATTTAGATTCTTGTCAAATAGTAAGCAATTCAGATCCAATTAGACCAGAACCATATGAACCAAGTAAAAATTCAACAATTGGTTTTCCAGTATCACCTGAAGTAATGGCTAAAAAATGTGGTGAAGCCGGTTGTAGAAAGCGATCAGAATCTTCGACAGTTGGCGTGGTTTTTGTGGTGATTGGCGCTGTTGTTGGTTCTTCTGTTACTGGACTTTTTCTGATCTTGCGGTATCGTCGCGAAAAACAGAAAATTGGAAACACTGCTGAAATTTCTAATATTCCGCTTAGTACCGACAAGATCAAGGAAGTCTACAGGAAAAACGTGTCACCACTTATAAGTTTGGAGTATTCCAATGGATGGGATCCATTATCCAAAGATCTCGGTGGTTATTCTCAGGAATTTCTCCAGAGTTTTATGTTTAATCTCGAAGAAGTAGATCGCGCAACTCAATGTTTCTCGGAGATGAATTTATTGGTGAAGAATAATATATCAGCTAACTATAGAGGAATCTTGAGAGATGGATCTGTTGTGGTTATAAAGTGCATTGCCAAGACAAGCTGCAAGTCTGATGAAACTGAATTCTTGAAAGGTTTGAAATTATTAACTTCATTAAAGCACGGAAATCTTGTTCGGTTAAGAGGCTTTTGTTGTTCGAAAGGCCGCGGAGAATGTTTTCTGGTTTATGATTTTGTGTCAAATGGAAGTTTGTCAAAGTATCTTGATGTCAAAAGAGGAAGTGCTGAGGTACTTGAATGGTCCACTAGAGTGTCCATAATCCATGGTATTGCAAAAGGTATTGGTTATCTGCATGGAAGCAAAGGAAGCAAACATTCGCTAGTTCATCAGAATATATCAGCTGAAAAAGTACTTCTCGATTATCGATACAATGCCTTACTTGCAGATTCAGGATTGCACAAACTCCTTGCAGACGATGTTGTTTTCTCCACCCTCAAAGCTAGTGCTGCTATGGGATACCTGGCGCCCGAATACACAACGACCGGCCGCTTCACTGAAAAGAGTGACGTGTATGCTTTTGGCGTGATAGTTTTCCAACTTCTCACTGGAAAACATGATATCACTCAGTTAAGTCGACAATCGTTAGAAACTGGTGGTTTGAAAGATATCATTGATGAGAATCTTGAAGGGAAGTTCTTAGAATCAGAGGCAGAGAAATTGGCGCGACTCGCTTTGGTTTGCACCGATGAATCTCCTCATCTCCGACCAACTATGGAGAATGTAATGGTAGAATTTAGTAATAAGTGGTAA 2028 0.3851 MSYLFFLLLKLQIFLIFSSQSLSLNTELDTLIAIKHSLDPENHVLISWNIHSDPCSGTFEGVACNEQGLVTNISLQGKGLSGKLPSVIGNLKSLTGLYLHFNALNGNLPKEIAGLTQLSDLYLNVNNFSGFIPHEIGNMSNLQVLQLCYNELNGSIPTELGKLKQLSVLALQYNHFSGAIPASLGELETLERLDLSFNTLFGPLPVTLTYPPKLQTLDIRNNSLSGSVPTALQRLKGGLQYSNNHGLCGTGFADLDSCQIVSNSDPIRPEPYEPSKNSTIGFPVSPEVMAKKCGEAGCRKRSESSTVGVVFVVIGAVVGSSVTGLFLILRYRREKQKIGNTAEISNIPLSTDKIKEVYRKNVSPLISLEYSNGWDPLSKDLGGYSQEFLQSFMFNLEEVDRATQCFSEMNLLVKNNISANYRGILRDGSVVVIKCIAKTSCKSDETEFLKGLKLLTSLKHGNLVRLRGFCCSKGRGECFLVYDFVSNGSLSKYLDVKRGSAEVLEWSTRVSIIHGIAKGIGYLHGSKGSKHSLVHQNISAEKVLLDYRYNALLADSGLHKLLADDVVFSTLKASAAMGYLAPEYTTTGRFTEKSDVYAFGVIVFQLLTGKHDITQLSRQSLETGGLKDIIDENLEGKFLESEAEKLARLALVCTDESPHLRPTMENVMVEFSNKW 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00899 675 Pfam Protein tyrosine and serine/threonine kinase 429 669 IPR001245 GO:0004672|GO:0006468
Trre14g00899 675 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Trre14g00899 675 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Trre14g00899 675 FunFam Protein NSP-INTERACTING KINASE 2 377 484 - -
Trre14g00899 675 Gene3D Transferase(Phosphotransferase) domain 1 485 674 - -
Trre14g00899 675 Gene3D Ribonuclease Inhibitor 181 247 IPR032675 -
Trre14g00899 675 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Trre14g00899 675 ProSiteProfiles Protein kinase domain profile. 406 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00899 675 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Trre14g00899 675 FunFam Protein NSP-INTERACTING KINASE 2 485 674 - -
Trre14g00899 675 Gene3D Phosphorylase Kinase; domain 1 382 484 - -
Trre14g00899 675 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 305 671 - -
Trre14g00899 675 SUPERFAMILY Protein kinase-like (PK-like) 383 669 IPR011009 -
Trre14g00899 675 SUPERFAMILY L domain-like 26 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00899 Trre-Chr14 7596799 7600755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00899 7 519 Miscellaneous Gene Families AT4G22730 50.936 2.64e-173 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Trre14g00899 PK_Tyr_Ser-Thr 1.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00899 - - qsu:111997683 886.715