Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00880 ATGGTCCTTGCTTTTTGTTGTTCCGTTAAACGGGGAAATCATCAAAGCCTACATCAAGAGTTATTACAACTCCAATCACTCTTCAAATATTTTAGAGATTTCAATGTGGACAGTGGAACATCTATGGCCAGTCCTCATGTTGCTGGTGTTGCGGCGCTTGAGAAAGGCGCACACCGTAATTGGAGCCCTGCGGCTATTCGGTTGGCAATAATGACAACATCAGATATATTGGATAGTACAAAGGAACACATCAAAGACATTGGAACAGGCAGCAGAGCAACACCTTTTGCATTGGGAGCTGGTCATATTAATCCTAATAGAGCACTTCACTCAGGTCTTGTTTATGATGTTGGTGTGCAAGATTATGTTAATCTTCTTTGTGCACTCAACTTCACACAGAAAAACATCGCTGTCGTTACAAGATCCTCTTTCAATGATTGCTCTAAACCTTCATTGGATCTTAACTACCCTTCTTTTGTTGCTTTTTTCAATGGTGAAAATTCTTCTGCAAAGACAAACCAAGAATTTTATAGAACAGTTACCAATGTTGGTGGTGAGGGACAAGCAACTTATGTTGCTAGCATTACTCCAATTAAAGGGTTTCGTGTCACTGTTATCCCAAACAAGCTGGTTTTCAATGAAAAGAATGAGAAGCTAAGCTACAAGTTGAGGATTGAAGTTGCAACAACTACAAAATTTAAGAAAGTGGATTTCGGATATTTAACTTGGATGGATGTGAAGAAACATGTTGTTAGGAGTCCAATTGTGGTCACGACCCTCAAATTGAAATCCTAG 795 0.3937 MVLAFCCSVKRGNHQSLHQELLQLQSLFKYFRDFNVDSGTSMASPHVAGVAALEKGAHRNWSPAAIRLAIMTTSDILDSTKEHIKDIGTGSRATPFALGAGHINPNRALHSGLVYDVGVQDYVNLLCALNFTQKNIAVVTRSSFNDCSKPSLDLNYPSFVAFFNGENSSAKTNQEFYRTVTNVGGEGQATYVASITPIKGFRVTVIPNKLVFNEKNEKLSYKLRIEVATTTKFKKVDFGYLTWMDVKKHVVRSPIVVTTLKLKS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00880 264 ProSiteProfiles Serine proteases, subtilase domain profile. 1 109 - -
Trre14g00880 264 Pfam Fibronectin type-III domain 153 257 IPR041469 -
Trre14g00880 264 Pfam Subtilase family 34 80 IPR000209 GO:0006508|GO:0008236
Trre14g00880 264 ProSitePatterns Serine proteases, subtilase family, serine active site. 39 49 IPR023828 -
Trre14g00880 264 Gene3D - 126 260 - -
Trre14g00880 264 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 257 IPR045051 -
Trre14g00880 264 Gene3D Peptidase S8/S53 domain 32 122 IPR036852 GO:0004252|GO:0006508
Trre14g00880 264 SUPERFAMILY Subtilisin-like 32 111 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00880 Trre-Chr14 7425403 7426197 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00880 33 260 Subtilisin-like Serine Gene Family AT4G34980 44.444 4.35e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00880 - - lja:Lj3g3v2504180.1 336.65