Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00878 ATGAACCTATCAGCCATGCCTAAACCTTTTCTGACACAACATGCTTGGTACATTTCCACTCTTTCTTCTGCATTACAGAATCCTCATCTCACAACAACAACCAAGTTCATTTACAGCTACACACATGTTATTACTGGTTTTAGTGCTAATCTAAGACCAGAAGAACATGAAGCTATCAAAAACTCTCTAGGATATATATCATCCATGAAAGATCTAAAAATGAAACTACTCACAACATATTCACCTAAATTCCTCGGTCTTAATCCTAACATTGGTGCTTGGCATGATTCAAGGTTTGGTAAAGGTATAATTATTGGTTTGGTTGACTCTGGAATTTGGCCTGAGAGTAAGAGTTTCAAAGATTACAACATGTCAAAAATTCCTTCAAAATGGAAAGGAGAGTGTGAAAATAGCATCCATTTTAATTCATCTCTTTGTAACAAGAAACTCATTGGAGCTAAATTCTTCAACAGAGGATTATTAGCACATGATCCCACTGCAAGCTTAGGTTTAAACTCCACACGTGACACACTAGGTCATGGAACCCACACTATATCAACAGCAGCTGGAAGCAGAGTTGACTCTGTTTCTTACTTTGGTTATGCAGCTGGAACAGCTTCAGGAGTTGCTTTGAATTCACATGTCGCAATGTATAAGGCTGCATGGAAAGATGAGTTGTATTCATCGGATGTAATAGCTGCAATTGATGCCGCAATATCGGACGGTATTGATGTTCTTTCATTGTCAATTCGTGTTGCAGATTTTGTACCTTTGTATGAAGATCCACTAGCCATAGCAACATTTGCAGCTATGAAAAAAGGTGTTTTTGTCTCGTGTGCAGCCGGAAATGGAGGTCCTGACCTTGAAACTCTTTACAATGGAATGCCTTGGGCTATAACTGTTGCTGCTGGTACTATGGATAGAGATTTTCAAGGGACTCTTACACTTGGAAATGGTAACAAAGTCATAGGATTTTCTGCGTATGTAGGAACATTTTCTTCACATAATGTTCCTATTGTTTTCATGGGTTTATGTGAAAATGTTAACGAATTGAAAAAAATGAAGAGAAAGATTGTGGTGTGTGAAGCCAAGAATGGAACTAGCCTTTTAGATCAAGCTGGTAATTTGGATGTAGCAAAAGTTTATGGAGCTGTTTTGATTTCAAATGCCGCAGACACATTCTATTCATCGGATGATTACACAATCTCTTTCAGGAATAGTTTGGCGGCCATCTTTGTTGTTCCATTAAATGGGGAAATCATCAAAGCCTACATCAAGAGTTATTACAACTCTAAGCACTCTTCAATAGCAAGCATGTCTTTTAGGAAAACAGGTTTTGGTCTTAGAACAGCACCTAGTGTTGATTCTTACAGTTCAAGAGGGCCATCATATAGCTGTCCATTTGTGTTGAAACCAGATATTACTGCACCCGGTACTTCCATTTTAGCGGCATGGCCTTCAAATGTCCCGGTGTCTCAAAAATATTTTAGAGATTTCAATTTGGACAGTGGGACATCTATGGCCTGTCCTCATGTAGCTGGTGTTGCGGCGCTTGTGAAAGGCGCACACGGTAATTGGAGCCCTGCAGCTATTCGGTCGGCAATAATGACAACATCAGATATATTGGATAGTGCAAAGGAACACATCAAAGACATTGGAACAGGCAGCAGAGCAACACCTTTTGCATTGGGAGCTGGACATGTTAATCCTAATAGAGCACTTCACCCAGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTCAACTTCACACAGAAAAACATCGCTGTCGTTACAAGATCCTCTTTCAATGATTGCTCTAAACCTTCATTGGATCTTAACTACCCTTCTTTTATTGCTTTTTTCAATGGTGAAAATTCTTCTGCAAAGACAAACCAAGAATTTTATAGAACAGTTACCAATGTTGGTGGTGAGGGACAAACAACTTATGTTGCTAGCATTACTCCAATTAAAGGGTTTCGTGTCACTGTTATCCCAAATAAGCTGGTTTTCGATGAAAAGAATGAGAGGCTAAGCTACAAGTTGAGGATTGAAGTTGCAACAACTACAAAATTAAAGAAAGTGGATTTCGGATATCTAACTTGGATGGATAGGAAGAAGCATGTTGTTAGGAGTCCAATTGTGGTCACGACCCTCAAATTGAAATCCTAG 2190 0.39 MNLSAMPKPFLTQHAWYISTLSSALQNPHLTTTTKFIYSYTHVITGFSANLRPEEHEAIKNSLGYISSMKDLKMKLLTTYSPKFLGLNPNIGAWHDSRFGKGIIIGLVDSGIWPESKSFKDYNMSKIPSKWKGECENSIHFNSSLCNKKLIGAKFFNRGLLAHDPTASLGLNSTRDTLGHGTHTISTAAGSRVDSVSYFGYAAGTASGVALNSHVAMYKAAWKDELYSSDVIAAIDAAISDGIDVLSLSIRVADFVPLYEDPLAIATFAAMKKGVFVSCAAGNGGPDLETLYNGMPWAITVAAGTMDRDFQGTLTLGNGNKVIGFSAYVGTFSSHNVPIVFMGLCENVNELKKMKRKIVVCEAKNGTSLLDQAGNLDVAKVYGAVLISNAADTFYSSDDYTISFRNSLAAIFVVPLNGEIIKAYIKSYYNSKHSSIASMSFRKTGFGLRTAPSVDSYSSRGPSYSCPFVLKPDITAPGTSILAAWPSNVPVSQKYFRDFNLDSGTSMACPHVAGVAALVKGAHGNWSPAAIRSAIMTTSDILDSAKEHIKDIGTGSRATPFALGAGHVNPNRALHPGLVYDVGVQDYVNLLCALNFTQKNIAVVTRSSFNDCSKPSLDLNYPSFIAFFNGENSSAKTNQEFYRTVTNVGGEGQTTYVASITPIKGFRVTVIPNKLVFDEKNERLSYKLRIEVATTTKLKKVDFGYLTWMDRKKHVVRSPIVVTTLKLKS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00878 729 Gene3D - 307 446 - -
Trre14g00878 729 ProSiteProfiles Serine proteases, subtilase domain profile. 79 574 - -
Trre14g00878 729 FunFam Subtilisin-like protease SBT1.5 102 316 - -
Trre14g00878 729 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 722 IPR045051 -
Trre14g00878 729 Pfam Peptidase inhibitor I9 13 76 IPR010259 -
Trre14g00878 729 Gene3D - 591 725 - -
Trre14g00878 729 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Trre14g00878 729 PRINTS Subtilisin serine protease family (S8) signature 503 519 IPR015500 -
Trre14g00878 729 PRINTS Subtilisin serine protease family (S8) signature 176 189 IPR015500 -
Trre14g00878 729 Pfam Fibronectin type-III domain 618 722 IPR041469 -
Trre14g00878 729 CDD PA_subtilisin_like 313 427 - -
Trre14g00878 729 Gene3D Peptidase S8/S53 domain 102 587 IPR036852 GO:0004252|GO:0006508
Trre14g00878 729 ProSitePatterns Serine proteases, subtilase family, serine active site. 504 514 IPR023828 -
Trre14g00878 729 SUPERFAMILY Subtilisin-like 76 578 IPR036852 GO:0004252|GO:0006508
Trre14g00878 729 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 76 IPR037045 -
Trre14g00878 729 CDD Peptidases_S8_3 75 540 IPR034197 -
Trre14g00878 729 Pfam Subtilase family 100 546 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00878 Trre-Chr14 7413043 7415232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00878 1 729 Subtilisin-like Serine Gene Family AT5G67090 46.277 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00878 - - gmx:100786751 914.835