Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00874 ATGGCTATAAGATATTGTTACAAAGATTTGGTTCCTTTTGGTGCTATGGTTACCATGGAATGCATCAACGTTGCCTTGAATACTCTCTTCAAAGCTGCTACCTTAAAAGGAATGAGTTACCATGTTTTTGTTGTTTATGCTTATGCTGTTGCTGCTTTTGTTCTTCTTCCTTCACCCTTTATCTCCAAAAGATCAAGAGTGCTTCCTCCTCTAAGTAAACCCATACTATACAAAATTGGTCTTCTTGGGGTGATAGGAAGTTCATCTCAAATCATGGGGTATACAGGTATTAGTTTAAGTTCTCCCACTCTATCTTCAGCAATTAGCAACTTGGTGCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGATGGAAAAGGTAGCTATAAGAAGTTTAAGTAGTCAAGCAAAGGTGTTGGGTACCATAGTATCAATATCAGGAGCATTTATAGTGACACTATACATAGGACCACCAATCATTATTGCACTCAGATCTTCCCTTCCACTTCATCAACCAATTAACACTCCAAAACCATCAGATCAAAATTGGGCCATTGGTGGCCTTTTATTGACAGCTGAGTATATATTGGTTCCTTTATGGTACATTGTACAGGTACAAATCATGAAGGTGTACCCTGATGAAATAACAGTAATCTTCTATTACAACTTATGTGTAAGCATTATAGCTGCTATTGTAGGGGTGATTAGTGAGCCAAATGCAAGTGCTTGGAAAATAGGACTCGATACATCACTTGCATCCATCCTTTGCTCGGGAATTTTCGGATCATTCCTGAACAATACAGTTCACGCATATGTACTGCGTATAAAGGGGGCCGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATAGCTGTTGCCATGGGAGTTGTGTTCCTTGGTGATACTCTCCACCTTGGAAGTTTAATTGGAGCAACAATAATATCAATTGGATTTTATACTGTAATGTGGGGAAAAGCAACAGAAGAGGTGGTTGAAGATGTCGCTATCCACGAAACATCAACTACACAAAATGTTCCTCTCTTGCAAAGCTATAAAACTGAAGATGAAAACAAAATGCATACAAGTGTATAA 1098 0.3852 MAIRYCYKDLVPFGAMVTMECINVALNTLFKAATLKGMSYHVFVVYAYAVAAFVLLPSPFISKRSRVLPPLSKPILYKIGLLGVIGSSSQIMGYTGISLSSPTLSSAISNLVPAFTFLLAIIFRMEKVAIRSLSSQAKVLGTIVSISGAFIVTLYIGPPIIIALRSSLPLHQPINTPKPSDQNWAIGGLLLTAEYILVPLWYIVQVQIMKVYPDEITVIFYYNLCVSIIAAIVGVISEPNASAWKIGLDTSLASILCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSLIGATIISIGFYTVMWGKATEEVVEDVAIHETSTTQNVPLLQSYKTEDENKMHTSV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00874 365 Pfam EamA-like transporter family 201 324 IPR000620 GO:0016020
Trre14g00874 365 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016020|GO:0022857
Trre14g00874 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00874 Trre-Chr14 7397658 7401732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00874 1 358 Nodulin-like Gene Family AT3G28050 58.221 3.26e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00874 - - gmx:100801438 540.036