Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00873 ATGGCTCCCGGATCGTCGGTTTCTATTGCATATCACCCCAATTTTGGACCTCATGATGACCTTATCATTTTAGAGCTGGATGAGAAACTGGTCCCAGATGTTTTGAATGAAAGGATGGTCTTAAGAGGACAGCCTGATGAAGATGCAGTTCTGTGTACTCAATCAAAAACATATGCTATGAAGTTTGTTGGAACTTCGAATTCTGTTTTGCTTGTACCACCAGCAAATCTATCAGATGAAAATTTACAGGCAAATGATAGTAATAATAGTGATGAGAAAGTTGTTGCAAATGTAATAAAAGTTGTACCTGGTAATATGGAGCTTATCGAGGTTTCACCCAGACTTGATAAACTTAGATTGCTTCTTTCGGAGAACACTTACAGATTTGATGAGAATGACATGGAAACTTTAGAAGATAATCAGGAATCTAAAACAGGATTATATAGCTGGAATGATCTTATAGATAATATCCAAGCTAGTGACGAGGAATTAAGGCTTGGATTGCAGGCTCTTTCCGCTGTGGAGATTAATGGGTATTGGAGATTAGTTGATGAGAGTTACATGGACATGATTTTGGGAATGCTTTTGAAAAATGCAGTGTTGAATGATTGGTCACTCAATGCTCTAAATGAAGATGAAGTCGTGAATATGCTAGAATCAGACGGATTTCCGTTGGTACTTGCAAGGCATTGCTTGCATGTATATGGCAAGCAAGTAAAAGAAAATGATTGCATGGAAAGCTGTGTGTGGAAGTTGGATGAAAAGCGGGTATGCATACACTTTGCAAGAGAAATCCTGAAAGGAGGTAAGAGGAAGTTAGAGAGTTTTATGGATGAATGGAGGAACAAGACTCCAGATGAAATGCATCCTACTTTTGATCTTATGGAAGGAGAGGTATTGACAGAGAAAATTGGAGTTGAGACATGGGTCCGTGCTTTCCGCGTGTCTTCTTTGCCTTCCACTCCAGCTGAACGTTTCTCCATTCTTTTCAGAGAGCGTGCAAAATGGGATTGGAAAGATCTGCAGCCCTATATCAGGGATCTGAATGTACCTGGTCTTTCTGCAGAAGGTATACTACTCAAATACACTCGAAAGACGCAACCATCACCTAATCAAGATCCAGTTTTCAGTGCAAGATAG 1140 0.3982 MAPGSSVSIAYHPNFGPHDDLIILELDEKLVPDVLNERMVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANLSDENLQANDSNNSDEKVVANVIKVVPGNMELIEVSPRLDKLRLLLSENTYRFDENDMETLEDNQESKTGLYSWNDLIDNIQASDEELRLGLQALSAVEINGYWRLVDESYMDMILGMLLKNAVLNDWSLNALNEDEVVNMLESDGFPLVLARHCLHVYGKQVKENDCMESCVWKLDEKRVCIHFAREILKGGKRKLESFMDEWRNKTPDEMHPTFDLMEGEVLTEKIGVETWVRAFRVSSLPSTPAERFSILFRERAKWDWKDLQPYIRDLNVPGLSAEGILLKYTRKTQPSPNQDPVFSAR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00873 379 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 3 379 IPR019128 GO:0007064|GO:0031390
Trre14g00873 379 Pfam Sister chromatid cohesion protein Dcc1 23 345 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00873 Trre-Chr14 7393174 7395653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00873 1 379 C3H Transcription Factor Family AT2G44580 55.844 2.02e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00873 K11271 - gmx:100817511 622.854