Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00826 ATGTGGTTAATAATCGAACAAACCGAACATGTACTTAATAAGGCCCTTTCGTTGGTCCTCAAGTGTCGTCCAAAAACCATCAAGAAACGCATCTTCTGCATCATTTACATTGCTGCTTTTAGCAAAACATCCTCCCAACTTGAAAACTCCATCGGCGATGTTACTTGGCTCCTAAATATCTCCTCTCCCGACAAAGAACACAACTGCCAAAATCTAATCCTTCCTTCCATTGCTTCCATTGCTTTCATTGACCCTGTCGTTGCCTTAGTTTGGGAGCTGATTGCCAGCCTCTGTACTGGCTCGCAAGAAGATCGTTCAGAGGCTGTCGCTTGCCTTGTGTCACTGGCACTTCAAAGTGACCGTTACGGAAAAATAATCATCGGGGAAGGAGGCGTGGGACCACTTTTGAAGCTGATGAAAGAAGGGAACATAGAAGGCCAAAAGAATGCTGCAAGAGCAATTGGTCTCCTCAAAGTCATAAACTCCATCATCATACTCATCACCAACGCATCTATGCTATGCGAACATGAGAGTTAA 537 0.4451 MWLIIEQTEHVLNKALSLVLKCRPKTIKKRIFCIIYIAAFSKTSSQLENSIGDVTWLLNISSPDKEHNCQNLILPSIASIAFIDPVVALVWELIASLCTGSQEDRSEAVACLVSLALQSDRYGKIIIGEGGVGPLLKLMKEGNIEGQKNAARAIGLLKVINSIIILITNASMLCEHES 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00826 178 SUPERFAMILY ARM repeat 31 158 IPR016024 -
Trre14g00826 178 Gene3D - 57 170 IPR011989 -
Trre14g00826 178 Pfam Armadillo/beta-catenin-like repeat 126 155 IPR000225 GO:0005515
Trre14g00826 178 PANTHER ARMADILLO REPEAT ONLY 4 3 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00826 Trre-Chr14 6749465 6750001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00826 40 154 U-box Gene Family AT2G23140 34.483 1.57e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00826 - - mof:131153895 184.882