Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00799 ATGCAAGAAGAAAACAACGTGGCTTTACTCTTCACATCTGACGGTGGAGCAACATTAAATGGACTATTAGAAGATGAATCAACGACATTAACGGCGGCGACGACGACGGAGGAAGAAGAAGAATCTTTGTCAGTGATGAGGTGTCCGGAGATGGAAGGGTTAGTGAAGAAAGCTATGAGGAAGAGAAATGATGAAGAAGAGAGTGAAGAAAGATGGGTTAGTTATTCAGAAGTTGTTGAAGAGAAAAAGGAAATGATGGAAGAAGTTAATAGTTGTGTTGGGATTGAAACGATGTCGTTTTTTGGATCTTTGTCTTTGAAACTTGATCATGATGGGATATTGAATGCTTGGTCTGATAAAGGTTCTCTTTATGTTGTTGATGGTGGTGATGAGGCACCACAGACTGTTCCTGATTTGTTGAATCCATCATCCATTTTTCCCAATGTATATGGTTATGGGGGTGATGTTAATGCGAACACATGGAAAGTTCCTGATGGTTGTGGAGCTAGCAATAACAATATGAAGGTGAAGGAAGAAATGGGTTGGAAGCTTGGTCAAAGAGAGGCAAGTTTGTTGAGATACAAAGAAAAGAGGCAAAGTAGACTCTTCGCTAAGAGGATCCGCTATGAAGTTCGCAAGTTGAATGCTGAAAAACGGCCTAGAATGAAGGGACGATTTGTGAAGAGGGAATGA 693 0.4084 MQEENNVALLFTSDGGATLNGLLEDESTTLTAATTTEEEEESLSVMRCPEMEGLVKKAMRKRNDEEESEERWVSYSEVVEEKKEMMEEVNSCVGIETMSFFGSLSLKLDHDGILNAWSDKGSLYVVDGGDEAPQTVPDLLNPSSIFPNVYGYGGDVNANTWKVPDGCGASNNNMKVKEEMGWKLGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00799 230 ProSiteProfiles CCT domain profile. 187 229 IPR010402 GO:0005515
Trre14g00799 230 Pfam CCT motif 187 229 IPR010402 GO:0005515
Trre14g00799 230 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 17 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00799 Trre-Chr14 6537457 6540734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00799 103 229 C2C2-CO-like Transcription Factor Family AT1G73870 40.909 9.38e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre14g00799 CCT 2.5e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00799 - - psat:127128050 358.221