Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00773 ATGAAAGTTTTAGATAGGGGGGGATTTGCAACGAAACTGAAAAACACTACACTCTCTTTAGCTGATCAGATCAAGGATTGCGGCGCATATTGCGAATGTCCAAACTGTCATTATCGTATAGACAACAGCGATGTTTCGTGGCCAGGCCTTCCTCTTGGTACAAAGTTTGATCCTTCTGATGTAGAACTATTGGAACATTTAGCAGCTAAATGTGGTGTTGGGAATAGAGAGCCTCACATGTTTATTGAAGAGTTCATCCCAACATTAGAAGGAGACCAAGGCATTTGCTATACACATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAGTGTTCATTTCTTTCATAGAACAATGAATGCATATAGTATTGGGCAGCGAAAGCGTCGAAAGATTCATCATCATGGTTCGACTGAACCTCATGTACGCTGGCATAAGACTGGTAAGACCAAAGCTGTAATAGAAAATGGAGTACATATGGGCTTTAAAAAGATCATGGTTCTATATATAAGATCTGACAAAGAATCCAAGGCCTACAAATCCGATTGGAAAATGCATCAGTACCATCTAGGGACCGATGAAGATGAGAAGAATGGAGAATATGTGGTTTCGAAAATATTTTATAAACAGGTTGAGAAAATCGAGGAGAAACCAATGGCTGAAGAACCTGACAATATAACATCGCGAACAAGTCCAAGGACTCCAAAACCAAATCCTCCAAATCCACCGCGCACAGGAAAATGTGTTGAAAATGATGATAACATCGATGAAGCCAAGGATGCCAAGTCTATCCCTACAGAATCACATGCCCCTCAATCTGATATTCAGGATCACGGCAACACAGAAAACGCGGCATGGTTAGCTGGTTTATCGCAGGCTTTGGAAAAATCCGAATATGATGGCTTGGAAGACATATTATTTTGCAAGGAGATTTTAGATTCATCTATTCTATTTGATGATTTTGGATTGGACTTAATCACTACTAATGACCTTGCATATTATGAAAACAAAACAACGGGAACCGGTAATGTAACTAGTGGAACATCAACTTCTGTCCTGGATACATTGGAATTCGGTAATCCTCCAGAAAACTCGGCATGGTTGGCTGGTGAATCACAGACTTTGGAAAATTCTGAATATAAAGGCTTGGATAACTTATTATTGTGCAATGAGGTTTTAGATTCGTCTGCTCTACTTGATGATTCTGGATTGGACTCGATCACTAACAGAATGACACAAAACGATAACATAACTAGTGGAACATCAACTTCTATCCTGGATACACTGGAATTGGGTACTCCTCCAGATTTTGATCTTTCGAATTTGACATTTGGTTCTCAAGACAGCATCCTTGACTGGGTGGACCGGTTATGA 1377 0.4001 MKVLDRGGFATKLKNTTLSLADQIKDCGAYCECPNCHYRIDNSDVSWPGLPLGTKFDPSDVELLEHLAAKCGVGNREPHMFIEEFIPTLEGDQGICYTHPENLPGAKKDGSSVHFFHRTMNAYSIGQRKRRKIHHHGSTEPHVRWHKTGKTKAVIENGVHMGFKKIMVLYIRSDKESKAYKSDWKMHQYHLGTDEDEKNGEYVVSKIFYKQVEKIEEKPMAEEPDNITSRTSPRTPKPNPPNPPRTGKCVENDDNIDEAKDAKSIPTESHAPQSDIQDHGNTENAAWLAGLSQALEKSEYDGLEDILFCKEILDSSILFDDFGLDLITTNDLAYYENKTTGTGNVTSGTSTSVLDTLEFGNPPENSAWLAGESQTLENSEYKGLDNLLLCNEVLDSSALLDDSGLDSITNRMTQNDNITSGTSTSILDTLELGTPPDFDLSNLTFGSQDSILDWVDRL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00773 458 Pfam No apical meristem (NAM) protein 51 191 IPR003441 GO:0003677|GO:0006355
Trre14g00773 458 ProSiteProfiles NAC domain profile. 50 210 IPR003441 GO:0003677|GO:0006355
Trre14g00773 458 MobiDBLite consensus disorder prediction 218 252 - -
Trre14g00773 458 FunFam NAC domain-containing protein 8 59 214 - -
Trre14g00773 458 Gene3D NAC domain 59 214 IPR036093 GO:0003677|GO:0006355
Trre14g00773 458 SUPERFAMILY NAC domain 39 210 IPR036093 GO:0003677|GO:0006355
Trre14g00773 458 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 295 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00773 Trre-Chr14 6326629 6329782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00773 33 219 NAC Transcription Factor Family AT1G28470 51.256 1.01e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre14g00773 NAM 9.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00773 - - mtr:25497909 581.637