Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00772 ATGGCTAGGAGCTGCTGGATTTTTAACAAAGGGGGATTTGCAACGAAACTGAAAAACACTACACTCTCTTTAGCTGATCAGATCAAGGATTGCGGCGCATATTGCGAATGTCCAAACTGTCATTATCGTATAGACAACAGCGATGTTTCGTGGCCAGGCCTTCCTCTTGGTACAAAGTTTGATCCTTCTGATGTAGAACTATTGGAACATTTAGCAGCTAAATGTGGTGTTGGGAATAGAGAGCCTCACATGTTTATTGAAGAGTTCATCCCAACATTAGAAGGAGACCAAGGCATTTGCTATACACATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAGTGTTCATTTCTTTCATAGAACAATGAATGCATATAGTATTGGGCAGCGAAAGCGTCGAAAGATTCATCATCATGGTTCGACTGAACCTCATGTACGCTGGCATAAGACTGGTAAGACCAAAGCTGTAATAGAAAATGGAGTACATATGGGCTTTAAAAAGATCATGGTTCTATATATAAGATCTGACAAAGAATCCAAGGCCTACAAATCCGATTGGAAAATGCATCAGTACCATCTAGGGACCGATGAAGATGAGAAGAATGGAGAATATGTGGTTTCGAAAATATTTTATAAACAGGTTGAGAAAATCGAGGAGAAACCAATGGCTGAAGAACCTGACAATATAACATCGCGAACAAGTCCAAGGACTCCAAAACCAAATCCTCCAAATCCACCGCGCACAGGAAAATGTGTTGAAAATGATGATAACATCGATGAAGCCAAGGATGCCAAGTCTATCCCTACAGAATCACATGCCCCTCAATCTGATATTCAGGATCACGGCAACACAGAAAACGCGGCATGGTTAGCTGGTTTATCGCAGGCTTTGGAAAAATCCGAATATGATGGCTTGGAAGACATATTATTTTGCAAGGAGATTTTAGATTCATCTATTCTATTTGATGATTTTGGATTGGACTTAATCACTACTAATGACCTTGCATATTATGAAAACAAAACAACGGGAACCGGTAATGTAACTAGTGGAACATCAACTTCTGTCCTGGATACATTGGAATTCGGTAATCCTCCAGAAAACTCGGCATGGTTGGCTGGTGAATCACAGACTTTGGAAAATTCTGAATATAAAGGCTTGGATAACTTATTATTGTGCAATGAGGTTTTAGATTCGTCTGCTCTACTTGATGATTCTGGATTGGACTCGATCACTAACAGAATGACACAAAACGATAACATAACTAGTGGAACATCAACTTCTATCCTGGATACACTGGAATTGGGTACTCCTCCAGATTTTGATCTTTCGAATTTGACATTTGGTTCTCAAGACAGCATCCTTGACTGGGTGGACCGGTTATGA 1389 0.4017 MARSCWIFNKGGFATKLKNTTLSLADQIKDCGAYCECPNCHYRIDNSDVSWPGLPLGTKFDPSDVELLEHLAAKCGVGNREPHMFIEEFIPTLEGDQGICYTHPENLPGAKKDGSSVHFFHRTMNAYSIGQRKRRKIHHHGSTEPHVRWHKTGKTKAVIENGVHMGFKKIMVLYIRSDKESKAYKSDWKMHQYHLGTDEDEKNGEYVVSKIFYKQVEKIEEKPMAEEPDNITSRTSPRTPKPNPPNPPRTGKCVENDDNIDEAKDAKSIPTESHAPQSDIQDHGNTENAAWLAGLSQALEKSEYDGLEDILFCKEILDSSILFDDFGLDLITTNDLAYYENKTTGTGNVTSGTSTSVLDTLEFGNPPENSAWLAGESQTLENSEYKGLDNLLLCNEVLDSSALLDDSGLDSITNRMTQNDNITSGTSTSILDTLELGTPPDFDLSNLTFGSQDSILDWVDRL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00772 462 FunFam NAC domain-containing protein 8 63 218 - -
Trre14g00772 462 Gene3D NAC domain 63 218 IPR036093 GO:0003677|GO:0006355
Trre14g00772 462 Pfam No apical meristem (NAM) protein 55 195 IPR003441 GO:0003677|GO:0006355
Trre14g00772 462 MobiDBLite consensus disorder prediction 222 256 - -
Trre14g00772 462 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 298 IPR044799 GO:0003700
Trre14g00772 462 ProSiteProfiles NAC domain profile. 54 214 IPR003441 GO:0003677|GO:0006355
Trre14g00772 462 SUPERFAMILY NAC domain 43 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00772 Trre-Chr14 6326629 6330483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00772 37 223 NAC Transcription Factor Family AT1G28470 51.256 1.14e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre14g00772 NAM 9.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00772 - - mtr:25497909 587.8