LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g00761	ATGGAGTCACCTGTTGATGGAGTTGATTGTTTACCAGAAGTTTATAATAATTCTGTTTCTGGCATAGTAGATCACAATCCTCCTTCGACATCCGGTGTTCCGCGCTCTTCTCGGCCGCCTTTGATGGCATCATCTAGAAATCAAGGAAGGATGAAAGATACCTATCAGGAACCTAACGATGTGAGCCATACCGAAACTTTTGAAAGTTGTTTGGCAAAGAATATTTCCACAATCGAAATGAAATTGTGCATCAGTGATGATTCCTCTAATCACAACTCCGACGAGATATTAGAATCTGAGAATTGCATATTAGGTTCGTCAAAAGGACACGTGGATCAGTCAAATTCGGAGATTATGTTTTGCTCAAGTCCTCAGAGTAGTTTATATTCCGCTGCTTATTCAGAAGCCAAAGAAAGTTTCACCAATACCGGAATCCATGAATCTGTTAGTGTTGATAAGTCGATTGAAAGCGGAGAGGTTACTAATTCGGGGGAGAGCAGGAAGACGAGCATCTGTAGAGGGAGTACCGGAAGTGACGTTAGCGATGAAAGCAGCATCAGTAGTTTGAGCAGTTCTTTATATAAACCGCATAAAGCAAATGATGTAAGATGGGAAGCAATTCAAGCTATCCGAGTTCGAGACGGTGGATTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAATTAAGTAGCACAAAGACTTGTTTTGCTATGAAAGTAATGAACAAGACTGAATTGTCGAGTCGCAAGAAGCTTCCGAGGGCTCAGACAGAGAGAGAGATATTGCAGTCTCTAGATCATCCGTTTCTACCTTCGTTGTACACACACTTTGAGACGGAGTCATTCTCTTGCTTGGTTATGGAGTTTTGTCCTGGTGGGGATCTCCATGCACTCCGGCAACGACAACCTGGGAAGTATTTTTCAGAACATGCTGCAAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCTGAGAACGTGTTGGTGAGAGAAGATGGTCACATAATGCTATCAGATTTCGACCTCTCTCTAAGGTGCGCCGTCAGTCCGACTCTAGTAAAATCTGCAAACTTTAACTTGGAGACAAAAGGCTCAGGATACTGCGTTCAACCCGCTTGCATCGAACCAACTTGTGTTATTCAGCCAGACTGCATCAAACCTTCTTGTTTCACGCCACGTTTTCTACAAAGCAAGTCCAAGAAGAAAGAAAAGAAGTTGAAACCTAAGAATGACGTGCACAATCAGGTGACACCTCTCCCTGAGCTTATGGCCGAACCCACAAATGCCCGATCAATGTCCTTCGTAGGCACGCACGAGTACCTTGCGCCTGAAATCATCAAAGGTGAAGGTCATGGCAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTATACGAGCTTTTGTTCGGTAGAACGCCATTCAAAGGTTCAGCAAATCGGGCAACTTTATTTAATGTAGTTGGGCAGCCCTTAAGATTTCCGGAATCTCCAAGTGTTAGCTTTGCTGCCAGGGACTTGATTAGGGGTTTACTTGTGAAAGAGCCTCAACATCGTCTTGCCTATAGACGCGGAGCTACAGAGATAAAACAACATCCATTCTTTCAAAATATTAACTGGGCGCTGATCCGTTGCGCCACTCCTCCAGAAGTGCCGAGACAGGCCATGAAAGCAGCACTCACACCTGAGAAGAAGCCGCCGGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA	1821	0.4393	MESPVDGVDCLPEVYNNSVSGIVDHNPPSTSGVPRSSRPPLMASSRNQGRMKDTYQEPNDVSHTETFESCLAKNISTIEMKLCISDDSSNHNSDEILESENCILGSSKGHVDQSNSEIMFCSSPQSSLYSAAYSEAKESFTNTGIHESVSVDKSIESGEVTNSGESRKTSICRGSTGSDVSDESSISSLSSSLYKPHKANDVRWEAIQAIRVRDGGLEMRHFRLLKKLGCGDIGSVYLAELSSTKTCFAMKVMNKTELSSRKKLPRAQTEREILQSLDHPFLPSLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSANFNLETKGSGYCVQPACIEPTCVIQPDCIKPSCFTPRFLQSKSKKKEKKLKPKNDVHNQVTPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQAMKAALTPEKKPPGVKPSGNYLDIDFF	606

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g00761	606	FunFam	serine/threonine-protein kinase D6PK-like	306	373	-	-
	Trre14g00761	606	CDD	STKc_phototropin_like	220	580	-	-
	Trre14g00761	606	SMART	serkin_6	222	560	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre14g00761	606	Gene3D	Phosphorylase Kinase; domain 1	220	305	-	-
	Trre14g00761	606	Gene3D	Transferase(Phosphotransferase) domain 1	306	375	-	-
	Trre14g00761	606	FunFam	serine/threonine-protein kinase D6PK-like	455	578	-	-
	Trre14g00761	606	MobiDBLite	consensus disorder prediction	152	186	-	-
	Trre14g00761	606	FunFam	Serine/threonine-protein kinase D6PK-like	220	305	-	-
	Trre14g00761	606	MobiDBLite	consensus disorder prediction	19	60	-	-
	Trre14g00761	606	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	343	355	IPR008271	GO:0004672\|GO:0006468
	Trre14g00761	606	ProSiteProfiles	Protein kinase domain profile.	222	560	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre14g00761	606	PANTHER	FLIPPASE KINASE 1-RELATED	85	583	-	-
	Trre14g00761	606	SUPERFAMILY	Protein kinase-like (PK-like)	196	580	IPR011009	-
	Trre14g00761	606	Pfam	Protein kinase domain	457	560	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre14g00761	606	Pfam	Protein kinase domain	223	373	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre14g00761	606	Gene3D	Transferase(Phosphotransferase) domain 1	454	578	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g00761	Trre-Chr14	6263986	6267013	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g00761	165	606	AGC Kinase Gene Family	AT5G47750	76.149	0.0	696

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Trre14g00761		Pkinase	3.9e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g00761	K08286		-	gmx:100802402	930.243