Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g00753 | ATGTCCTCCTCATTCTCCGTCATTTCAAATTTATCTCCTTCTTCCCCACACTCCAACATTCACAACTTCCACACCTTCTTCATCTCCAATCACAACAAACCGCCCCAAACCTCTTTTCTCTTTTCCAAATTCTGCCATCATTCCTCTATCTTCCACAACACTCTCGCTGCCAAACGCCTCCGGTTCGCTGCTTCCATTTTACCCGATGCCGATTGGTGGACTTTACCGAAACATCCAGAAGAAGACGATGCAGAACCGACGGCGGCGATGCTCGCTCTCAGACGAATGTTGGATTTGGTTACCGATGAGCGCTGGGTCGCACTTGGAGCTTTCGGGTCTCTTGTCATTGCTGCTCTTTCAGAAATCACCATGCCAAGTATATTAGCAGCATCAATATTTTCAGCACAGAGTGGTGAGACTGTGGTATTCTCTAGGAATGCAATGTTTTTGGTTCTTCTATGTTTTACTTCAGGGATATGCAGTGGTTTGCGAAGTGGCTGCTTTGGAATTTTGAATGTAACCTTGGTAAAGCGTCTACGAGAAAACTTGTATGCAACCATTCTTCTTCAGGACATATCTTATTTTGATAAAGAAAAAGTTGGTACCTTGACAAGCAGGCTCGCCGCAGACTGTCAACGGCTTTCGCATGTTATAGGAAATGATCTTCAGTTGATATTACGCAACACGTTGCAGGGAACAGGAGCGATAATTAATTTACTGGCTTTATCTTGGCCTCTAGCATTATCTGCACTGATGATTTGTTCTGTGTTATCTGCAATTTTCCTGGTTTATGGCAGGTATCAAAGAAAAGCAGCAAAGTTAACCCAAGATTTCACAGCTTGTGCCAATGACGTAGCTCAGGAGACACTTTCTTTGATAAGAACTGTCCGGGTGTATGGAACTGGAAAAGAAGAATTTGAAAGGTACAATCAGTGGCTACAAAAATTAGCATTTATTAGCGTTCGAGAGAGTGTGGGTAATGGTTTCTGGAACCTGAGCTTTAACACTCTTTATCGGTCAACTCAGATAATTGCAGTGATTTTTGGAGGAATGTCTGTTCTCAGTTGCCGTGTAACTGCTGAGCAACTTACTAAGTATGTATTATACTGTGAGTGGTTGATTTATGCTGCTTGGAGGGTGACAAACAGCTTATCATCATTACTCCAGTCCATTGGAGCATCTGAACAAATTTTCCAAATGATGAATCTTTTGCCCTGTGACCAATTCTTAGTGAAAGGAATTAAATTGCAGAGGTTAATGGGCCATATTCAGTTTGTAAATGTATCATTTCATTATCCAGCAAGGAGTATGATACCTGTTCTAGATCACTTAAACTTCTCTGTAAAACCAAATCAAGTCATTGCCATTGTTGGTCTGAGTGGTAGTGGAAAGAGTACATTAATCAACCTTTTACTTCGTCTCTATGAGCCTAGTAGCGGCCAGATATGTATTGATGGTATCCCTCTGAAGAAGTTGGATATCAGGTGGCTGAGGCAGAACATCGGATATGTTTCACAGGAACCGAATATCTTTCACATGGACATAAAGTCAAACATAAAATATGGTTGTCCTAGGAACATAAATCAAGAAGATGTTGAACAGGCAGCAAAACTGGCATACGCCCATGACTTTATTTCATCACTTCCTAATGGCTATGAAACCCTTGTTGATGACAATGCGCTTAGCGGGGGACAAAAACAGCGAATCGCCATTGCAAGGGCCATTCTTAGGGACCCAGTTATTATGATTCTTGACGAACCAACCAGCGCCTTGGATTCTGAAAGTGAGCATTACATCAAGGAGGTATTGTATGCATTCAAAAATGAATCTAAATCAAGAACCGTCATTATCATAGCACATAGGCTTTCTACTGTAAAAGCTGCTGACAGGATCATTGTTATGGATAATGGTCAGATTATTGAGATGGGTAACCATGAAGAGCTTATAGTCAAGAATGGGCTCTATGCGAAGTTAAATAAATTTCAAGCAGATATTGTAACTTGA | 2004 | 0.4127 | MSSSFSVISNLSPSSPHSNIHNFHTFFISNHNKPPQTSFLFSKFCHHSSIFHNTLAAKRLRFAASILPDADWWTLPKHPEEDDAEPTAAMLALRRMLDLVTDERWVALGAFGSLVIAALSEITMPSILAASIFSAQSGETVVFSRNAMFLVLLCFTSGICSGLRSGCFGILNVTLVKRLRENLYATILLQDISYFDKEKVGTLTSRLAADCQRLSHVIGNDLQLILRNTLQGTGAIINLLALSWPLALSALMICSVLSAIFLVYGRYQRKAAKLTQDFTACANDVAQETLSLIRTVRVYGTGKEEFERYNQWLQKLAFISVRESVGNGFWNLSFNTLYRSTQIIAVIFGGMSVLSCRVTAEQLTKYVLYCEWLIYAAWRVTNSLSSLLQSIGASEQIFQMMNLLPCDQFLVKGIKLQRLMGHIQFVNVSFHYPARSMIPVLDHLNFSVKPNQVIAIVGLSGSGKSTLINLLLRLYEPSSGQICIDGIPLKKLDIRWLRQNIGYVSQEPNIFHMDIKSNIKYGCPRNINQEDVEQAAKLAYAHDFISSLPNGYETLVDDNALSGGQKQRIAIARAILRDPVIMILDEPTSALDSESEHYIKEVLYAFKNESKSRTVIIIAHRLSTVKAADRIIVMDNGQIIEMGNHEELIVKNGLYAKLNKFQADIVT | 667 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g00753 | 667 | PANTHER | ABC TRANSPORTER B FAMILY | 85 | 659 | IPR039421 | - | |
Trre14g00753 | 667 | SMART | AAA_5 | 450 | 638 | IPR003593 | GO:0016887 | |
Trre14g00753 | 667 | Pfam | ABC transporter transmembrane region | 113 | 371 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Trre14g00753 | 667 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 108 | 389 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Trre14g00753 | 667 | Pfam | ABC transporter | 441 | 589 | IPR003439 | GO:0005524 | |
Trre14g00753 | 667 | FunFam | Multidrug ABC transporter ATP-binding protein | 415 | 665 | - | - | |
Trre14g00753 | 667 | ProSitePatterns | ABC transporters family signature. | 561 | 575 | IPR017871 | GO:0005524|GO:0016887 | |
Trre14g00753 | 667 | Gene3D | ABC transporter type 1, transmembrane domain | 88 | 406 | IPR036640 | GO:0005524|GO:0016020 | |
Trre14g00753 | 667 | SUPERFAMILY | ABC transporter transmembrane region | 94 | 405 | IPR036640 | GO:0005524|GO:0016020 | |
Trre14g00753 | 667 | CDD | ABC_6TM_TAP | 110 | 397 | - | - | |
Trre14g00753 | 667 | Gene3D | - | 413 | 665 | IPR027417 | - | |
Trre14g00753 | 667 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 416 | 662 | IPR027417 | - | |
Trre14g00753 | 667 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 423 | 661 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g00753 | Trre-Chr14 | 6226882 | 6233572 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g00753 | 178 | 662 | Calmodulin-binding Proteins | AT2G36910 | 34.073 | 1.36e-73 | 256 |