Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00749 ATGTGCTTACCATTGAGACCCTTGACAAGGTATTTGTATATGAGTAAATTGGTTACACTTCCTGGAACATCAGGTGCACTTTTGCGGCTTGTAATTGATCAGTTGCAGAAGGTAACTCACGAAGGTTGTGTCAACCGGGTACGCTCCATGACACAAAATCCCCACATATGTGCATCTTGGGCAGAATATGATTATGTGCAGGCAGAGAAAATAGGATTGGAATATATGGATGTTGAAGCTTTGAAGAAGCTAAACAAAAATAAGAAACTGGTGAAGAAATTGGCAAAGAAGTACCATGCCTTTTTAGCTTCTGAAGCTGTTATCAAGCAGATTCCTTGTCTTTTGGGTCCTGGTCTCAACAAGGCAGTTGTTTCCCACCAAGAATCTCTTGAGGCTAAGGATAATGAAACTAAGGCAATGCATGAATCAGACAATGAGACACCTAGATGA 450 0.4089 MCLPLRPLTRYLYMSKLVTLPGTSGALLRLVIDQLQKVTHEGCVNRVRSMTQNPHICASWAEYDYVQAEKIGLEYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPCLLGPGLNKAVVSHQESLEAKDNETKAMHESDNETPR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00749 149 MobiDBLite consensus disorder prediction 130 149 - -
Trre14g00749 149 SUPERFAMILY Ribosomal protein L1 52 122 IPR023674 -
Trre14g00749 149 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 46 139 - -
Trre14g00749 149 Gene3D - 53 140 IPR016095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00749 Trre-Chr14 6190657 6194352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00749 56 139 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 74.157 9.67e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00749 K02865 - oeu:111373161 106.301