Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00737 ATGGGAAGGGATTCTTCATTGCAACTCAAAATTGTATGTTTCAATATTGTGTTACATTTGTTAGCATGTTCAAGGATTCAAATAAGCCACTGCTTGGTACCTCAAAGGTCCATTATGAGCATAGGTGTTGTGCTTGATTTGGATTCATTAATGGGAAAACAACAGAAGATAGCAATGGAAATTGCAGTGCAAGAGTTCAATAACCAATTAAGTTCTTCTAAGCTGGATTTGCAGATAAAAGATTCACATGGAAATTCTGCTCAAGTAATTGCTGGTGTTATGGATCTCTCATTGAGCAACCAAGTGTTGGCCATCACAGGAACTATTACACACAATGAAGCAACACTAGCAGGTGAATTCAGTAACACCATAAAGAACATTCCTATCATGTCTCTTACTTCTTTTACAGGCAAACAAGAATTATTATCTTCAAGATTGCCACATTTCATCCAAGTAGGGGATGATATTAACCTTAACATGCAATGCATTGTAGCAATTGTAGGATATCTCAAATGGAAAAAGGTAACAGTAATTTATGAACTTAATAATGACTTTTCCTCTGATCCAGGAAGGATACTACTTAGTCTCTCTTATTCTCTTAAACTAGTTGGTTCTGAAATTGATAACCATTTAGCTTTTCCTTCCTTATCCACTCTTTTAGATCCAAACACTACAATTGAAAATGAGCTTAATAAGCTGAAAAGAAGGAGTAATAGGGTCTTCTTGATTGTTAACTCTTCTTTGGAGCTGGCTAACTTGCTTTTTGAGAAAGCAAATCAAATAGGTTTGATGGAAAAAGAATCTGTGTGGATTATCCCAAATATGGTTGCTGGTCTTCTTGATTCAGTTAACTCTTCTGTTATATTCAACATGCAAGGTGTTGTAGGATTTAAAACATACTTTATGGAAATGAATGAGGCTTTTAGAGAGTTCAAATTCAAATTTCAAAGAAGGTTTGCACTAGAATACCCTAAAGAAGATAACATTAACCCAAGTATCTTTGCACTTCAAGCTTATGATGCAACTTGGGCTATTTTTGAGGCTGCAAATAAGTCATCGTTACAAGGAAAGCTTAGCCTTGAACAATTCTCAGAAAAAATTTTGTCCAATAAATTTGACAGACTAAGTAGAAACACTTTCTCAAAGAATAGACCACTGATGCAATCACAATCCTTTAACATAATAAATGTGATAGGGAAAAGTTATAGAGAAATGGCATTTTGGACTCCAACACTTGGTTTTTCCAAGAACTTATTTAGCCATCAATTAATGGAGAAGAAAAACACAAACAACGATCATGATTCTAATGGAGTTTTCGGCACAGTATATTGGCCTGGAGACATGCAATCGGTTCCTAAGGGATGGACTCACAGTAATGAGGAAAGATCATTGAAAATAGGAGTACCTTCCAATGGCGCCTTTACTCAGTTTGTGAATGTAACACAAGACAAGAGTATGAACGGATCTTCAATCACTGGTTTCTCTATTACTGTCTTTAAAGAAGCTGTCAAACTCTTGCCTTATGATTTACATTACAATTTTGTTCCGTTCAATGGCTCATACGATGAAATGGTTCATCAGGTCCACAATAAAGCATTGGATGGTGCGGTTGGTGATACAGGGATAATGGCATATAGATATAGTTTAGTTGATTTCTCACAACCTTATATTGAATCTGACCTCCACATGGTGGTTACTGAACAACCAGAAAAATCAAAAACATGGAAGTTTTTGGATGCCTTTACTAAAGAGATGTGGCTTTTGATAGCAGCTATTCATATTTTTGTAGGCTTTGTTATTTGGTTGATTGAAGGGGAAGATAATCCAGAACTAAGCGGAATTGGTTCCATGCTATGGTTTTTAGTCACTGTACTATTTTATGCACACAGAGAACCAATAAGAAGACCGTTAGCTCGAATAGTGTTGGGACCGTGGTTATTTGCTATTTTCATTGTGACAAATAGTTTCACAGCAAGTTTGACATCCATAACTATATCACAAGTAAAGCCATCTGTGTTAGATATACAAACCCTTAAAGAAAGAAACTCACCAGTTGGATGTAATGGAAATTCATTCATTGTGAATTATTTGACAGCAGTACTAAAGTTCAAGCCTGAGAACATTAGGAAAATAAATTCCATCAGTGACTACCCTGCTGCCTTTGAGAACAAGGATATAGAAGCCGCCTTCTTTGTCGGACCGCATGCTAGAGTCTTTCTAGCAAAGTACTCGTGTAAGGGACTGGTCAACGCAGGGAACATTTTCCGACTTGGTGGCTTTGGCTTTGTATATCCAAAAGGTTCTAGTTTGGCTACTGATATATCAGAGGCATTGCTGAATATGATAGAGAGTGGACAAATAAAAGAGCTGGAAAACGATATGTTGAATAAAATAAAGAATGAAGGCATAGCCAATTGTTCTTCAAAGAAAAAGGGGAAAGATAATTCATCAATTGGCATTCCACCTTTCCTTGGTTTGTTTTCCGTCTGTTCTTCTTTTGCTATTATTGCTTTGTCATATCACACAATTTGTTTGTTGGTGAAGAAGAACTTAGAGACCTTGATATACCTCATAGTATTGACATTAGTTCAATTGTGGAGAATATGGAACTGGACAACCAAATACTTCTCTCGGATCATGAGAAGAGTGAGCAGTTGCATAGAAACAAGAAATGCAGAAGAGGATGTCAATAATGGCCAGCAAAACCCGGTGCTAGTAGTTGCTCATGCTTAA 2733 0.3644 MGRDSSLQLKIVCFNIVLHLLACSRIQISHCLVPQRSIMSIGVVLDLDSLMGKQQKIAMEIAVQEFNNQLSSSKLDLQIKDSHGNSAQVIAGVMDLSLSNQVLAITGTITHNEATLAGEFSNTIKNIPIMSLTSFTGKQELLSSRLPHFIQVGDDINLNMQCIVAIVGYLKWKKVTVIYELNNDFSSDPGRILLSLSYSLKLVGSEIDNHLAFPSLSTLLDPNTTIENELNKLKRRSNRVFLIVNSSLELANLLFEKANQIGLMEKESVWIIPNMVAGLLDSVNSSVIFNMQGVVGFKTYFMEMNEAFREFKFKFQRRFALEYPKEDNINPSIFALQAYDATWAIFEAANKSSLQGKLSLEQFSEKILSNKFDRLSRNTFSKNRPLMQSQSFNIINVIGKSYREMAFWTPTLGFSKNLFSHQLMEKKNTNNDHDSNGVFGTVYWPGDMQSVPKGWTHSNEERSLKIGVPSNGAFTQFVNVTQDKSMNGSSITGFSITVFKEAVKLLPYDLHYNFVPFNGSYDEMVHQVHNKALDGAVGDTGIMAYRYSLVDFSQPYIESDLHMVVTEQPEKSKTWKFLDAFTKEMWLLIAAIHIFVGFVIWLIEGEDNPELSGIGSMLWFLVTVLFYAHREPIRRPLARIVLGPWLFAIFIVTNSFTASLTSITISQVKPSVLDIQTLKERNSPVGCNGNSFIVNYLTAVLKFKPENIRKINSISDYPAAFENKDIEAAFFVGPHARVFLAKYSCKGLVNAGNIFRLGGFGFVYPKGSSLATDISEALLNMIESGQIKELENDMLNKIKNEGIANCSSKKKGKDNSSIGIPPFLGLFSVCSSFAIIALSYHTICLLVKKNLETLIYLIVLTLVQLWRIWNWTTKYFSRIMRRVSSCIETRNAEEDVNNGQQNPVLVVAHA 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00737 910 Pfam Ligand-gated ion channel 793 830 IPR001320 GO:0015276|GO:0016020
Trre14g00737 910 FunFam Glutamate receptor 459 574 - -
Trre14g00737 910 SUPERFAMILY Periplasmic binding protein-like II 440 792 - -
Trre14g00737 910 SMART GluR_14 463 797 IPR001320 GO:0015276|GO:0016020
Trre14g00737 910 Pfam Receptor family ligand binding region 56 355 IPR001828 -
Trre14g00737 910 Gene3D - 662 758 - -
Trre14g00737 910 PIRSF IGluLR_plant 7 855 IPR017103 -
Trre14g00737 910 Gene3D - 35 156 - -
Trre14g00737 910 FunFam Glutamate receptor 574 706 - -
Trre14g00737 910 Pfam Bacterial extracellular solute-binding proteins, family 3 488 792 IPR001638 -
Trre14g00737 910 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 849 IPR015683 -
Trre14g00737 910 FunFam Glutamate receptor 159 329 - -
Trre14g00737 910 Gene3D - 157 330 - -
Trre14g00737 910 Gene3D - 759 791 - -
Trre14g00737 910 Gene3D - 457 585 - -
Trre14g00737 910 CDD GluR_Plant 464 795 - -
Trre14g00737 910 SUPERFAMILY Periplasmic binding protein-like I 39 455 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00737 Trre-Chr14 6096479 6101982 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00737 20 838 Ion Channels AT2G29120 29.357 1.13e-101 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00737 - - mtr:11432453 1317.37