Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00735 ATGGTGCAAAGAGGGCACTGCTTAGTGCCACAAAGGTCCATTATAAGCATTGGTGCTGTGCTTGATTTGGATTCATTAATGGGAAAACATCAGAAGATAGCAATGGAAATTGCAGTGCAAGAGTTCAACAACCAATTAAGTTCTTCTAAGCTGGATTTGCAGATAAAAGATTCACATGGAAATTCTGCTCAAGTAATTTCAAGTGTTATGGATTTCTCAAAGACCAACCAAGTGCAAGCCATCATAGGAACTATTACACACAATGAAGCAACACTAGCAAGTGAATTCAGTGACACCATAAACAACATTCCTATCATGTCTCTAACTTCATTTGCAAGTAAACCACAATTATCATCTCCTAGATTTCCACATTTCATCCAAGTAGGAGATGATATTAACCTTAACATGCAATGCATGGCATCAATTGTAGGAAAATTCAAATGGAAAAAAGTGACAATAATTTACGAGCTTAACAATAATGACTTTTCCTCTGATCCAGGAATACTATTTAGTCTCTCTTATTCTCTTAAACTTGTTGGTTCTGAGATTATTAATCACTTAGCTTTTCCTTCACTTTCAACTCTTTCAAATCCAAAATCTACAATTGAAAATGAGCTTAATAAGCTTAAAAAAGAGACTAATAGGGTCTTCTTGATTATTCATTCTTCTTTGGAGCTAGCCAATATGCTTTTTGAGAAAGCAAAACAAATACGTTTGATGGAAAAAGGTTCTGTTTGGATTATACCAAATGAAGTTTCTAGCCTTCTTGATTCAGTTAACTCTTCGGTTATCGTCAACATGCAAGGTGTTATTGGATTTAAAACACACTTCATGGAAATGAATGAGGCTTTAAGAAAATTTAAATTCAAATTCCAAAGAAATTTTGCATTAGAATATCCTGAAGAAGATAACATTAGCCCAAGTTTCTTTGCATTTCAAGCATATGATGCAACTAAGGCTACTTTTGAGGCTGCAAATAAATCATCATCACAAGGAAAATTCATCCTTGAGAAAGAATTTTCAAAGAATGGACAATTGCTACATTCACCAACCTTCAACATAATTAATGTGATAGGGAAAAGTTATAGAGAAATGGCATTTTGGTCTCCAAAACTTGGTTTTTCCAAGAACATTGTTAATGTTAGCCATAATGATGATGATTTTGATGGAGTTTTCGACACGGTTTATTGGCCAGGAGACATGAAATCCATTCCTAAGGGTCACAATAAAGAGGAAAGGAATTTGACAATAGCTATACCTTCCAATGGTGCTTTTACTCAGTTTGTGAATGTGGAATATGATCATAGCAAAAATGTAACTTCCATTAACGGTTTTTCAATCAAAGTCTTTGAAGCAGCTGTGAGACGTTTACCTTATGTTTTAAATTACAATTTTTCTCCCTTTAGTGGCTCATATGATGAAATGGTTGATCAAGTCTATAATAAGACATTGGATGCTGCTGTAGGTGATACATCAATAGTGGCATATAGATATCATTTAGTTGACTTCTCACAACCTTATGTTGAATCTGGCCTTCATATGGTGGTTACTGAACAACCAGCAAAATCAAAAACATGGAAGTTTTTGGATGCCTTTACTAAAGAGATGTGGCTTATGATGATAGCTATGCATGTTTTTGTGGGATTTGTTATTTGGGTGATTGAAAGAGAAGTAAATGAAGATTTAAGGGTATTTGGGTCCATGCTTTGGTTTTTAGTCACTGTACTATTTTATGCACACAGAGAACCAATAAGAAGACCCTTAGCTAGAATTGTGCTGACACCATGGTTATTTGCTATTTTCATTGTGACAAATAGTTTCATAGCAAGTTTAACATCCATAACTATATCACAAGTAAAGCCATCTGTGTTAGATATTCAGACCCTTAAAGAAAGAAATTCTCCAATTGGCTGTGATGAGAATTCCTTCATTGTCAAGTATTTGACTGATGTACTAAAGTTCAAGCAAGAGAACATTAAGAAAATAAAATCCATGAGTGACTACCCTGCTGCCTTTGAGAACAAGGAAATAGAAGCCGCCTTCTTTGTCGCGCCTCATGCTAAAGTCTTTCTAGCAAAGTACTCATGTAAGGGCCTCATCAAAGCGAAGGACACTTTCAGGCTCGGTGGCTTCGGTTTTGTATTTCCAAAAGGTTCGAGTCTTGCTGCAGATATATCAGAGGCATTGTTGAATATGATAGAGAGTGGAGAAACAGAACAGCTAGAAAAAGACATGTTGAATGAGATAGAGAATGAAAGCAAAGCTAACTGTTCTTCGGAGAGCAAGAGAAAAAGTAACACAACGATAGGCCTTTCGCCTTTCGTTGGTCTATTTTCGATTTGTTCTACTTTTGCTAGTCTTGCTTTGTCGTATCACATTATTTGTTTGTTGGTGAAGAATGTAGAGACTTTGACAAGCAACATAGTATTGGCATTAAGACAGTTATGGAGAATATGGAGATGGACAACCAACTTTTTTGCTCGGTGCTGTTCAAAACTCCGATCGATAATTATCAGAAGTTGCACAGAAACAAGAACTGCAGAAGAGAATGTGACAAATAGCCAGCAAGTCCCAGTTGTGATTGAGCTTGTTGATAGTGTATTAGCTGCTCATGCTTCATGA 2622 0.3585 MVQRGHCLVPQRSIISIGAVLDLDSLMGKHQKIAMEIAVQEFNNQLSSSKLDLQIKDSHGNSAQVISSVMDFSKTNQVQAIIGTITHNEATLASEFSDTINNIPIMSLTSFASKPQLSSPRFPHFIQVGDDINLNMQCMASIVGKFKWKKVTIIYELNNNDFSSDPGILFSLSYSLKLVGSEIINHLAFPSLSTLSNPKSTIENELNKLKKETNRVFLIIHSSLELANMLFEKAKQIRLMEKGSVWIIPNEVSSLLDSVNSSVIVNMQGVIGFKTHFMEMNEALRKFKFKFQRNFALEYPEEDNISPSFFAFQAYDATKATFEAANKSSSQGKFILEKEFSKNGQLLHSPTFNIINVIGKSYREMAFWSPKLGFSKNIVNVSHNDDDFDGVFDTVYWPGDMKSIPKGHNKEERNLTIAIPSNGAFTQFVNVEYDHSKNVTSINGFSIKVFEAAVRRLPYVLNYNFSPFSGSYDEMVDQVYNKTLDAAVGDTSIVAYRYHLVDFSQPYVESGLHMVVTEQPAKSKTWKFLDAFTKEMWLMMIAMHVFVGFVIWVIEREVNEDLRVFGSMLWFLVTVLFYAHREPIRRPLARIVLTPWLFAIFIVTNSFIASLTSITISQVKPSVLDIQTLKERNSPIGCDENSFIVKYLTDVLKFKQENIKKIKSMSDYPAAFENKEIEAAFFVAPHAKVFLAKYSCKGLIKAKDTFRLGGFGFVFPKGSSLAADISEALLNMIESGETEQLEKDMLNEIENESKANCSSESKRKSNTTIGLSPFVGLFSICSTFASLALSYHIICLLVKNVETLTSNIVLALRQLWRIWRWTTNFFARCCSKLRSIIIRSCTETRTAEENVTNSQQVPVVIELVDSVLAAHAS 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00735 873 Gene3D - 135 307 - -
Trre14g00735 873 Gene3D - 10 134 - -
Trre14g00735 873 Pfam Bacterial extracellular solute-binding proteins, family 3 441 743 IPR001638 -
Trre14g00735 873 FunFam Glutamate receptor 135 305 - -
Trre14g00735 873 FunFam Glutamate receptor 410 525 - -
Trre14g00735 873 Gene3D - 623 710 - -
Trre14g00735 873 Pfam Ligand-gated ion channel 744 781 IPR001320 GO:0015276|GO:0016020
Trre14g00735 873 SUPERFAMILY Periplasmic binding protein-like II 410 743 - -
Trre14g00735 873 FunFam Glutamate receptor 525 657 - -
Trre14g00735 873 Gene3D - 711 743 - -
Trre14g00735 873 SMART GluR_14 414 748 IPR001320 GO:0015276|GO:0016020
Trre14g00735 873 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 802 IPR015683 -
Trre14g00735 873 CDD GluR_Plant 415 746 - -
Trre14g00735 873 Gene3D - 408 537 - -
Trre14g00735 873 Pfam Receptor family ligand binding region 32 342 IPR001828 -
Trre14g00735 873 CDD PBP1_GABAb_receptor_plant 16 378 IPR044440 -
Trre14g00735 873 PIRSF IGluLR_plant 2 343 IPR017103 -
Trre14g00735 873 PIRSF IGluLR_plant 329 855 IPR017103 -
Trre14g00735 873 SUPERFAMILY Periplasmic binding protein-like I 12 407 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00735 Trre-Chr14 6078590 6083391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00735 11 817 Ion Channels AT2G29100 30.349 5.72e-109 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00735 - - mtr:11432453 1276.54