Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00732 ATGGATCCAAAAACCGGGTTCAACTCAATTTCCAGAACCTTCCAAACTCTAAGACCCCCACTAAACCTTCCTCCACCACATGCCACAATCTCCGCCGCAACCTACACTCTCTCCCTCCATCACAAATCCCCATTCTCCTCTTCCTCCACTTTCCTTATCGACTCAACCACATCTCACCAACTATCTTACTCCATCTTCATCCAACGCTCAAAAACCCTCGCAATAAACCTCACTCTCCGCGGACTCACCAAACACCACACCGCATTGATACTTTCCCCTAACATTTTCCAGGTTCCAATCCTCTACTTCGCATTACTCTCCATCGGCGTCATTGTTTCACCCGCAAATCCAATTTCATCTCCTTCAGATATTTCTCATTTCATAAATCTCTCTAAACCTGTAATCGCATTTACGACGTCGTTTTATGGAAAGCTTCCCAAACTACCTCTCGGAACGATTCTCATTGACTCGCCCGAGTTCGACTCACTCACCACGGAAGAAACTAAAGATAATACTTCGACTGCAGCGTTACCGGAGGTGAGTCAATCTGACGTGGCGGCGATTCTATACTCATCGGGGACAACAGGGAAATCGAAAGGCGTAATGCTTACACATCGGAATTTGACGGCGGCGGTGGCGGCGCACGACGCTGTTCAGATTCCGAAAGCGAGTCCTGCGGTGTGTTTGCTTACGGTACCGTTTTTTCATGTGTATGGTTTTACATTCCTCTTGAAATGTGTGGCTATGATGGAAACGGTTGTGGTGATGGAGAGATTTGGATTGGGGAAAATGTTGAGTGTTTTGGAGAGGTTTCGAGTGAGTAATCTTGTGGTGGCACCGCCGCTGGTGGTGGCGATGAGTAAAGAGGAAGCGACGGAAGGGTATGATTTGTCGTCGTTGAAAAATATTACCTGTGGCGGTGCTCCGTTGGGAAAAGATAATTTTGATGCTTTCAAAGCAAAATTCAGTCAAGTATCCATTATTCAGGGATATGGTTTAACTGAATCAACAGCCGGTGTTATCCGAATAGTAGGTCCTGAGGAAGCTAGCCGAGCAGGAACTACGGGTAGGCTGATTTCAGGGGTGGAATCTAAAATAGTGAACCCCAACACAGGAGAGACAATGTCTCCAGGTGAAGAAGGTGAACTTTGGGTTAGAGGACCTCCAATTATGAAAGGTTATGTTGGAGATCCAGTGGCAACTTCTAACACTATAGTGGATGGATGGTTGAGAACCGGAGATATTTGCTATTTTGACAATGAAGGTTTCGTGTATGTTGTAGATAGGTTGAAAGAATTGATCAAATATAAAGGCTACCAGGTACCTCCTGCAGAGCTGGAACAACTGCTCCAGTCTCATCCAGAGATAAAAGATGCTGCAGTTATTCCATACCCTGATGAGGATGCTGGTCAGGTTCCCCTAGCTTTTGTGATAAGGCAACCTCAAAGCTCAATGGGTGAAGCAGAAATAATAGATTTTGTAGCCAAACGGGTTGCACCATACAAGAAGATAAGGCATGTGGTATTTGCCAATTCCATACCAAAGAATGCAGCAGGAAAGATACTAAGGAAAGACTTGTTGAATAAAATTCTCCATCAACGAACTTTCGCTAGGTTATAA 1620 0.4512 MDPKTGFNSISRTFQTLRPPLNLPPPHATISAATYTLSLHHKSPFSSSSTFLIDSTTSHQLSYSIFIQRSKTLAINLTLRGLTKHHTALILSPNIFQVPILYFALLSIGVIVSPANPISSPSDISHFINLSKPVIAFTTSFYGKLPKLPLGTILIDSPEFDSLTTEETKDNTSTAALPEVSQSDVAAILYSSGTTGKSKGVMLTHRNLTAAVAAHDAVQIPKASPAVCLLTVPFFHVYGFTFLLKCVAMMETVVVMERFGLGKMLSVLERFRVSNLVVAPPLVVAMSKEEATEGYDLSSLKNITCGGAPLGKDNFDAFKAKFSQVSIIQGYGLTESTAGVIRIVGPEEASRAGTTGRLISGVESKIVNPNTGETMSPGEEGELWVRGPPIMKGYVGDPVATSNTIVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVPPAELEQLLQSHPEIKDAAVIPYPDEDAGQVPLAFVIRQPQSSMGEAEIIDFVAKRVAPYKKIRHVVFANSIPKNAAGKILRKDLLNKILHQRTFARL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00732 539 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Trre14g00732 539 SUPERFAMILY Acetyl-CoA synthetase-like 49 530 - -
Trre14g00732 539 Gene3D - 24 431 IPR042099 -
Trre14g00732 539 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 528 - -
Trre14g00732 539 Pfam AMP-binding enzyme 50 436 IPR000873 -
Trre14g00732 539 Pfam AMP-binding enzyme C-terminal domain 445 520 IPR025110 -
Trre14g00732 539 CDD 4CL 43 526 - -
Trre14g00732 539 Gene3D - 432 533 IPR045851 -
Trre14g00732 539 FunFam 4-coumarate--CoA ligase 2 432 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00732 Trre-Chr14 6070869 6074078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00732 1 526 Monolignol Biosynthesis Gene Families AT5G63380 50.369 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00732 K01904 - gmx:100801143 674.085