Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00730 ATGGAAGAAGAAAACAATACCAGAACCTGTAGCTCCACCACAATAATGGATCCAAAAACCGGGTTCAACTCAATTTCCAGAACCTTCCAAACTCTAAGACCCCCACTAAACCTTCCTCCACCACATGCCACAATCTCCGCCGCAACCTACACTCTCTCCCTCCATCACAAATCCCCATTCTCCTCTTCCTCCACTTTCCTTATCGACTCAACCACATCTCACCAACTATCTTACTCCATCTTCATCCAACGCTCAAAAACCCTCGCAATAAACCTCACTCTCCGCGGACTCACCAAACACCACACCGCATTGATACTTTCCCCTAACATTTTCCAGGTTCCAATCCTCTACTTCGCATTACTCTCCATCGGCGTCATTGTTTCACCCGCAAATCCAATTTCATCTCCTTCAGATATTTCTCATTTCATAAATCTCTCTAAACCTGTAATCGCATTTACGACGTCGTTTTATGGAAAGCTTCCCAAACTACCTCTCGGAACGATTCTCATTGACTCGCCCGAGTTCGACTCACTCACCACGGAAGAAACTAAAGATAATACTTCGACTGCAGCGTTACCGGAGGTGAGTCAATCTGACGTGGCGGCGATTCTATACTCATCGGGGACAACAGGGAAATCGAAAGGCGTAATGCTTACACATCGGAATTTGACGGCGGCGGTGGCGGCGCACGACGCTGTTCAGATTCCGAAAGCGAGTCCTGCGGTGTGTTTGCTTACGGTACCGTTTTTTCATGTGTATGGTTTTACATTCCTCTTGAAATGTGTGGCTATGATGGAAACGGTTGTGGTGATGGAGAGATTTGGATTGGGGAAAATGTTGAGTGTTTTGGAGAGGTTTCGAGTGAGTAATCTTGTGGTGGCACCGCCGCTGGTGGTGGCGATGAGTAAAGAGGAAGCGACGGAAGGGTATGATTTGTCGTCGTTGAAAAATATTACCTGTGGCGGTGCTCCGTTGGGAAAAGATAATTTTGATGCTTTCAAAGCAAAATTCAGTCAAGTATCCATTATTCAGGGATATGGTTTAACTGAATCAACAGCCGGTGTTATCCGAATAGTAGGTCCTGAGGAAGCTAGCCGAGCAGGAACTACGGGTAGGCTGATTTCAGGGGTGGAATCTAAAATAGTGAACCCCAACACAGGAGAGACAATGTCTCCAGGTTATGTTGGAGATCCAGTGGCAACTTCTAACACTATAGTGGATGGATGGTTGAGAACCGGAGATATTTGCTATTTTGACAATGAAGGTTTCGTGTATGTTGTAGATAGGTTGAAAGAATTGATCAAATATAAAGGCTACCAGGTACCTCCTGCAGAGCTGGAACAACTGCTCCAGTCTCATCCAGAGATAAAAGATGCTGCAGTTATTCCATACCCTGATGAGGATGCTGGTCAGGTTCCCCTAGCTTTTGTGATAAGGCAACCTCAAAGCTCAATGGGTGAAGCAGAAATAATAGATTTTGTAGCCAAACGGGTTGCACCATACAAGAAGATAAGGCATGTGGTATTTGCCAATTCCATACCAAAGAATGCAGCAGGAAAGATACTAAGGAAAGACTTGTTGAATAAAATTCTCCATCAACGAACTTTCGCTAGGTTATAA 1620 0.4506 MEEENNTRTCSSTTIMDPKTGFNSISRTFQTLRPPLNLPPPHATISAATYTLSLHHKSPFSSSSTFLIDSTTSHQLSYSIFIQRSKTLAINLTLRGLTKHHTALILSPNIFQVPILYFALLSIGVIVSPANPISSPSDISHFINLSKPVIAFTTSFYGKLPKLPLGTILIDSPEFDSLTTEETKDNTSTAALPEVSQSDVAAILYSSGTTGKSKGVMLTHRNLTAAVAAHDAVQIPKASPAVCLLTVPFFHVYGFTFLLKCVAMMETVVVMERFGLGKMLSVLERFRVSNLVVAPPLVVAMSKEEATEGYDLSSLKNITCGGAPLGKDNFDAFKAKFSQVSIIQGYGLTESTAGVIRIVGPEEASRAGTTGRLISGVESKIVNPNTGETMSPGYVGDPVATSNTIVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVPPAELEQLLQSHPEIKDAAVIPYPDEDAGQVPLAFVIRQPQSSMGEAEIIDFVAKRVAPYKKIRHVVFANSIPKNAAGKILRKDLLNKILHQRTFARL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00730 539 Pfam AMP-binding enzyme C-terminal domain 445 520 IPR025110 -
Trre14g00730 539 CDD 4CL 56 526 - -
Trre14g00730 539 Gene3D - 432 533 IPR045851 -
Trre14g00730 539 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Trre14g00730 539 Gene3D - 39 431 IPR042099 -
Trre14g00730 539 Pfam AMP-binding enzyme 65 436 IPR000873 -
Trre14g00730 539 SUPERFAMILY Acetyl-CoA synthetase-like 64 530 - -
Trre14g00730 539 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 528 - -
Trre14g00730 539 FunFam 4-coumarate--CoA ligase 2 432 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00730 Trre-Chr14 6070869 6074123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00730 7 526 Monolignol Biosynthesis Gene Families AT5G63380 48.276 3.06e-180 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00730 K01904 - gmx:100801143 642.884