Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00714 ATGACATATTTTTATCTCAATCTTGTTTTTCTTTCTTTGTTTTTCTTCATTCATAGTACTCATGAGCTACAATTTGCTCAAACTCAAGTTCTGTTACAGTTAAGAAAGTATCTTGAATACCCTACCTCTCTGCAAGTTTTTGAAAATTACAATTTAGACCTTTGTAGCATTCCTCCATCTCAACATTATGTTAGTATTAAATGTGAGGGTAATTCAGTAACTGAGCTCAAAATCATTGGAGACAATCATAAACATGCAAAGGTTTCTAATTTCAATGGTTTTGCAGTTCCAAATCAAACACTATCCAAAACTTTCTCTATTGATTCTTTTGTCACAACATTAACAAGGTTAACAAATTTAAAGGTACTTAGTTTGGTTTCTTTAGGTATATGGGGCCCACTTCCTGATAAGATTCATAGGTTATCATTGCTTGAAGTTTTGGATTTGAGTTCAAATTTCTTATTTGGTTTTATTCCACCAAAGATAGGTACATTGGTGAATCTTCAAATGCTAACACTTGATGGAAATTATTTTAATGCAACAATGCCTAATGTTTTTGAATCTTTGTCTAATTTAACTATCTTGAGTATGAAAAATAATCACTTAAAGGGTTCATTTCCTTTTTCATTATGCAAAATTAAGTCTCTTACTGATATTTCATTTTCACATAATGAATTATCTGGTGCATTGCCTAATCTCGCTTCGCTTTCGAGGTTACGTGTGTTGGATTTAAGAGAAAATGGTTTTGATTCTGAGTTACCATTGATGCCGAAATCAGTAGTCACGGTATTACTGAGTAAAAACTCGTTATCCGGGGAGATTCCTAGTGAGTTTGGTGAATTGAATCAGCTTCAACATCTTGATCTTTCGTATAATCGTCTTGGTGGGGTGCCACCATCTTCGTTGTTTTCTTTGACAAACATTAGTTACTTGAATTTGGCAAATAATAATCTAAGTGGTTCAATTCCAAAGAAACTAAAATGTGGAAGCAAACTTGGATTTGTGGATATTTCTAGTAACATGTTAAGTGGTTTTGTTCCTTTTTGCTTGGAAAGTACTTCTGATAGAAGAGTTGTTAGATTTGGTGGAAATTGTTTATCTGTTAATTTTCAACCTCAGAATCAGAAGAATAGTTCTTATTGTGAAGAATTCTCAACCTCAAGAAAGATGAAATTTTGGAGATGGGAACTTGATGCTGCAATTGCTATCATTGTTGTGGTTTTGATTTTACTTTTAGCTTTTGGAGTTTTCTTTTACAGAAAGTTTCATTCAAGAGAGATATATAGACATGAGATGTTGCCAAAGATTGTTCATGATAATTCAACAACAGGAGTTTCCTCTGAATTCCTTGCTAGTGCAAGATATATTTCTCAAACAATGAAGCTAGGGACACAAGCTACTCCAAGTAGTAGACACTTTTCCATTGAAGAATTGAAGGAAATCGCAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGATCCATAGGAAAGCTGTACAAAGGTAAACTAGATAATGGATCTTATGTGATGATAAGAACATTAACTCTGAGAAAGAAATTCTCATTACAAAATCTCAAAGCTAGGTTGGATTTACTGCCAAAGCTTCACCATCCGAATTTGGTTAGTCTCTTAGGTCATTGTATTGATGGTAGTGGAAAAGATGGTGCTAGTAACCACAAGCTTCATCTTGTGTACGAGTATGTGCAAAATGGCGATTATCGTACACATTTGTCAGAATTTTCGTCGGATAAGGCACTAAAATGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTTTTACATACTGGAATTATACCAGGCTGTTTTAGAAACCAATTAAAGACGAACAATGTTTTACTTCACGAACACCGCTTTCCCAAACTAAGCGACTATGGTATGTCCTTGATCGCCGAAGAGGTCGAAAACATTGAGGTAAAGGGAGTGATTCCAAAATCTTGCCAAAGGGAAGAATTAGAGGATGATGTTTACAATTTTGGTTTCATATTGTTTGAATCACTTGCTGGTCCCATAGCAAGTGAGAAAGGAGAAGCATTCTTTCTTAATGAAAGGGCATCGTTTGATAGTCATGATGGTAGAAAAAGAATAGTAGATCCAGTAGTGTTGACAAGTTGCTGTCAAGAATCTTTATCAATTGTAATATCTATCACAACCAAATGCATATCTCCACAATCATCGTCTCGTCCTTCTTTCGAAGATGTCCTATGGAATTTACAATATGCAGCTCAAGTTCAAGCCACAGCAGATGCAGATTCTATGTCCTAG 2301 0.3468 MTYFYLNLVFLSLFFFIHSTHELQFAQTQVLLQLRKYLEYPTSLQVFENYNLDLCSIPPSQHYVSIKCEGNSVTELKIIGDNHKHAKVSNFNGFAVPNQTLSKTFSIDSFVTTLTRLTNLKVLSLVSLGIWGPLPDKIHRLSLLEVLDLSSNFLFGFIPPKIGTLVNLQMLTLDGNYFNATMPNVFESLSNLTILSMKNNHLKGSFPFSLCKIKSLTDISFSHNELSGALPNLASLSRLRVLDLRENGFDSELPLMPKSVVTVLLSKNSLSGEIPSEFGELNQLQHLDLSYNRLGGVPPSSLFSLTNISYLNLANNNLSGSIPKKLKCGSKLGFVDISSNMLSGFVPFCLESTSDRRVVRFGGNCLSVNFQPQNQKNSSYCEEFSTSRKMKFWRWELDAAIAIIVVVLILLLAFGVFFYRKFHSREIYRHEMLPKIVHDNSTTGVSSEFLASARYISQTMKLGTQATPSSRHFSIEELKEIARNFDLSTYIGEGSIGKLYKGKLDNGSYVMIRTLTLRKKFSLQNLKARLDLLPKLHHPNLVSLLGHCIDGSGKDGASNHKLHLVYEYVQNGDYRTHLSEFSSDKALKWSDRLAILIGVAKAVHFLHTGIIPGCFRNQLKTNNVLLHEHRFPKLSDYGMSLIAEEVENIEVKGVIPKSCQREELEDDVYNFGFILFESLAGPIASEKGEAFFLNERASFDSHDGRKRIVDPVVLTSCCQESLSIVISITTKCISPQSSSRPSFEDVLWNLQYAAQVQATADADSMS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00714 766 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 24 258 - -
Trre14g00714 766 Gene3D Ribonuclease Inhibitor 258 390 IPR032675 -
Trre14g00714 766 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 569 766 - -
Trre14g00714 766 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 260 386 - -
Trre14g00714 766 Gene3D Phosphorylase Kinase; domain 1 446 568 - -
Trre14g00714 766 SUPERFAMILY L domain-like 88 367 - -
Trre14g00714 766 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Trre14g00714 766 Pfam Leucine rich repeat 261 318 IPR001611 GO:0005515
Trre14g00714 766 SUPERFAMILY Protein kinase-like (PK-like) 465 750 IPR011009 -
Trre14g00714 766 Pfam Protein tyrosine and serine/threonine kinase 487 748 IPR001245 GO:0004672|GO:0006468
Trre14g00714 766 ProSiteProfiles Leucine-rich repeat profile. 283 304 IPR001611 GO:0005515
Trre14g00714 766 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 448 568 - -
Trre14g00714 766 Gene3D Transferase(Phosphotransferase) domain 1 569 765 - -
Trre14g00714 766 Gene3D Ribonuclease Inhibitor 26 160 IPR032675 -
Trre14g00714 766 Pfam Leucine Rich Repeat 144 161 IPR001611 GO:0005515
Trre14g00714 766 Gene3D Ribonuclease Inhibitor 161 257 IPR032675 -
Trre14g00714 766 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 263 746 - -
Trre14g00714 766 ProSiteProfiles Protein kinase domain profile. 485 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00714 766 SMART LRR_typ_2 189 223 IPR003591 -
Trre14g00714 766 SMART LRR_typ_2 236 259 IPR003591 -
Trre14g00714 766 SMART LRR_typ_2 165 188 IPR003591 -
Trre14g00714 766 SMART LRR_typ_2 141 163 IPR003591 -
Trre14g00714 766 SMART LRR_typ_2 305 329 IPR003591 -
Trre14g00714 766 SMART LRR_typ_2 281 304 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00714 Trre-Chr14 5958650 5962511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00714 6 718 Miscellaneous Gene Families AT5G14210 55.034 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Trre14g00714 PK_Tyr_Ser-Thr 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00714 - - gmx:100813412 1132.47