Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00710 ATGGGCACAGTAGAAATGATGATTACATTCCACATGAAAACTTTGGTCTTTTTTCTTTGCCTCATTCTCTCTTCATTAGGTGAAAACTTGTTAACTTGTGAGACAACATCACCACATGATTCTATCTACCATTGTAATGAAAATGATTCACAAAATCATCATTGTGAAACATTTGCACTCTTTTTCACAAACTCTCACTATTCCTCTCTCTCAAACCTTACCTTATACTTAGGACTCAATAAGTTTATCATAGCAGAAACCAATGGTTTCTCTGCAGAAACTGAGTTTCTTCCATATAACCATCCTCTTCTTATACCAATTGATTGCAAATGCAAAAAAAGTGGTTTTTTTCAAGCTGAGTTAACAAAAACTACTATCAAAGGAGAAAACTTTTATGACATTTCTCATTCACTTGAAGGCTTAACAACTTGCAAAGCTATCAAAGATAACAACATTGGTGTCTCACCTTGGAACCTTGATTCTAAACTCAAGTTGATTGTCCCTTTGAAATGTGCTTGCCCTTTTTCTTCTTTTGTTATACCAAAACCAAAATTTCTTCTTTCTTATCCTATAATTGAAAATGATACAATTTCAAATTTGGCCTTAAAGTTCGATATTACAAAGGAAGCTATTGTTAGTTCTAATAGCTTTTTATCATCATCATCATCAGAAGTTCTTAGAACTAGAAGCTTAGAACCATTTACTTCTATTCTAATTCCATTGAATGAGAAACCTTTCTTTTTTCTTGATCCTTTAGTTAAACCAAAACAATCCAATTCAGATTTTCCAAGAACAAACAATATTTCAATAAATAGTCCACACAAGAAAAAAACAATGAGAAAGAGTGAAGTTTATATTGGCCTAATTGGTGTTGCAATTGGTGCTTTCTTTGCTTTAGTGGTAACTTTTTTCTTTATGTGGTTGAAGCAAAAGAAGGTGGAAGAAAATTCATGCAAAGACAGAGATTTGGAGCTACAACATTTAAATCAAAGTGTGAGAACTACAAGTGATAAGAAAGTTTCATTTGAAGGGTCACAAGATACATTTGATAGTAAAATCGTGGATGCAACGCCGCGTAAGATGTTGCTTGAGACATACACAATTGAAGATTTGAGAAAAGCAACTGAGGATTTTAGTTCAAATTGTCACATTGATGGATCAGTTTTTCATGGTTGTTTAAATGGGAAGAACATGGCAATCAAAAGAGTCAAAACCGAAATGGTGTCGAAATTAGATCTTGGCCTTTTTCTTAATGCAAATCATCATCATCCAAACATAATTAACCTTCTTGGAACAAGTATTTCAGAAGGGTCATCAGATTCAGAATCTTTTTTGGTTTTTGAGTATGCTAAAAATGGTTCATTGAAAGATTGGCTTCATGGTGGCTTAGCCATCAAGAATCAATTCATTGCTTCTTGCTATTGTTTCTTGAATTGGGATCAAAGGCTTAGGATTTGTCTTGATGTTGCTAGTGCTTTGGATTACATGCACAATGTTATGATACCAAGTTATGTGCATAGAAATGTGAAGAGTAGGAACATCTTTTTAGATGAAGAATTTGGTGCTAAGATAGGTAATTTTGGTATGGCAAGTTTTGTTGAGAATGAAACTGAGGATTCACAATTTTATTCAACTAATTATGCTACTTGGAGTATTGGTTATTTGGCACCTGAATATGTTCATCAAGGTATAGTTTCAACAAGCATTGATATATTTGCTTATGGTGTTATTTTGTTAGAAATTTTATCTGGTCAAACACCTATAAGTGGATCAAGTGATAGAGGTGAAGGAAGTGTTTGGCTTAGTGATAAAATAAAAACTACTTTGATGTCAGAAAATAATGTGAATGAATTGCTAAGGGAATGGATTGATAGTGCATTAGGGGACAATTACTCATTTGATGCAGCTTTGAAAGTGGCTAATATTGCAAGAGCTTGTGTAGAGGAAGATTGTTCTTTGAGGCCTAATGCAAGAGAGATTGTTGAGAAGATGTCAAGATTAGTAGAGGAATTACCAAATGAGGAACATCAAATTTTGATGAGTGAAAGCTCTTGCAAACCTCTTGTGGAAGCAATATGTGAAAAATCTATCAAGTGA 2097 0.3343 MGTVEMMITFHMKTLVFFLCLILSSLGENLLTCETTSPHDSIYHCNENDSQNHHCETFALFFTNSHYSSLSNLTLYLGLNKFIIAETNGFSAETEFLPYNHPLLIPIDCKCKKSGFFQAELTKTTIKGENFYDISHSLEGLTTCKAIKDNNIGVSPWNLDSKLKLIVPLKCACPFSSFVIPKPKFLLSYPIIENDTISNLALKFDITKEAIVSSNSFLSSSSSEVLRTRSLEPFTSILIPLNEKPFFFLDPLVKPKQSNSDFPRTNNISINSPHKKKTMRKSEVYIGLIGVAIGAFFALVVTFFFMWLKQKKVEENSCKDRDLELQHLNQSVRTTSDKKVSFEGSQDTFDSKIVDATPRKMLLETYTIEDLRKATEDFSSNCHIDGSVFHGCLNGKNMAIKRVKTEMVSKLDLGLFLNANHHHPNIINLLGTSISEGSSDSESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLNWDQRLRICLDVASALDYMHNVMIPSYVHRNVKSRNIFLDEEFGAKIGNFGMASFVENETEDSQFYSTNYATWSIGYLAPEYVHQGIVSTSIDIFAYGVILLEILSGQTPISGSSDRGEGSVWLSDKIKTTLMSENNVNELLREWIDSALGDNYSFDAALKVANIARACVEEDCSLRPNAREIVEKMSRLVEELPNEEHQILMSESSCKPLVEAICEKSIK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00710 698 Gene3D Transferase(Phosphotransferase) domain 1 450 686 - -
Trre14g00710 698 Pfam Protein kinase domain 386 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00710 698 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 671 - -
Trre14g00710 698 Gene3D Phosphorylase Kinase; domain 1 351 449 - -
Trre14g00710 698 SUPERFAMILY Protein kinase-like (PK-like) 361 662 IPR011009 -
Trre14g00710 698 ProSiteProfiles Protein kinase domain profile. 351 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00710 698 FunFam PTI1-like tyrosine-protein kinase 3 450 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00710 Trre-Chr14 5923449 5925545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00710 43 690 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 39.021 2.49e-141 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre14g00710 Pkinase 8.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00710 - - tpra:123891373 1298.88