Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00702 ATGAATTTGATTTCTAATTTTGTTGATAAAAAAATGTGGATGTTCATTGTTCTCGTATTGGGTTTAATAGTTGGGACTCAATCATCCACAATTACACCTACACTTGAAATGGAAGCAAATGCTATATTGAAGAGTGGATGGTGGGACACATCTTATGAACCTTTCAACTTCAAATGTTATTGTAATTGGTCTAATATTATTTGCAACAAGGATAGAAGCATTAAATCAATCCACTTAGATCCTCAGTATTCAGAAGTGGTGCGGGGCTATCCAAAATTTGCAACACTCAACTTGTCTGTTTTTCACAATTTAGAAAGCCTTGTTATCAAGTCAATTGGGCTACAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCCAAGCTCACTCATCTTGATCTATCTGACAATTCTCTTACAGGTGAGGTACCTTCTTCACTAGGCAACCTTAGACAATTACAGTACCTAGACATCTCTTACAATGGCCTTTATGGTTTGATTCCTCATGAGTTTGGATTCATTGAACATCTCATTGCATTAAATCTATCAAACAATATAATTGAAGGTGAGATTCCTTCTTCACTAGGAAATCTCACCAAACTCACTCATCTTGATATGTCTGCCAATTCTCTTGTAAGTATGATACCTCCTTCACTAGGAAATCTCAGCCTATTAGAGGAGCTAGACATTTCTCGCAACTACTTTGAAGGATTCATTCCTGTTGAGTTGGGGTTCCTGAAAAATCTCATTAGATTAGATCTATCTAACAATAGACTAAATAGAAACTTGCCCATTTCCCTTTCAAATCTCACACAATTATATTACCTTGACATCTCTTACAATTACCTCACTGGTTCCCTTCCATCTAACTTCAATCAATTAACTAAATTGCGAGTGTTGTTGTTAAATTACAACTACATTAGCAGAACCTTTTCGATGATCAATCTCTCTCAATTAGAAACTCTTGATATTTCCCACAATTTACTCCGAGGTAAACTTCCTTCAAATTTTTTTCCATTTCAAGCTTCCATTGACCTCAGTTACAACCTCATTAGTGGTGAAATTCCTTCTCAGCTTGGACATATTTTTCAATTTAATTTAAGCAATAATAATCTCACAGGAATGGTTCCCCAATCTCTCTGTAATGTCACTATTTTGGACATTTCCTACAATTATTTGAAGGGTCCTATTCCATTTTGTATTGATCCTCACAAGATAATAGGGAACAAGGATGTTTGTACTGACATTTTAGATTATCAAATCCGCTTCCAATTTCAACCATGCAAGAAAAGTAATAAAGCAAATCACAATATGGTTGTTGTTGTTGTTGTTCCTATCCTTATGATTCTAATGTTATCATTCTTACTTCTCAAGTGCTTGAAATTTCGTCAAAATTTTATTAAGAACAAGCATGCAAACACAACCACAACAACAAAAAATGGGGATTTGTTTTGCTTATGGAATTATGATGGAAAAATAGCATATGATGATATTATCAAAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCATGTGGAAAAATTGTTGCCTTAAAAAAACTTCACGGATACGAAGCAGAGGTTCCTTCTTTCGATGAAAGTTTTAGAAATGAAGTGAGAATATTATCAGAAATAAGACACAAGAATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAGTCATGTTTTTGATTTATCAGTACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTAGAAGCCATGGAATTCAATTGGAGAAAAAGGCTTAACATTGTTAAAGGAGTTGCATTTGCTCTATCTTATCTTCATCATGATTGCAGCCCTTCGATTGTGCATAGAGATGTATCGAGTAACAATATCTTGCTAAACTCTGACTGGCAGCCTACTGTTTCTGACTTTGGCACAGCTCGACTCCTTCAACATGATTCATCCAATCGAACAATAGTTGCTGGAACAATCGGATATATCGCTCCTGAGCTTGCTTATACCATGGTCGTGAGCGAAAAGTGTGATATATACAGCTTTGGGGTGGTGGCACTAGAATGTTTAATGGGAAGGCACCCTGGGGAAATATTGTCGTCACTTCAATTAGCATCAACTCAAAGCATGAAATTATGTGAAGTATTAGACCAACGTCTTCCATTTCCAAATAATGCAATGGTTTTACTTGACATAATTCGTGTAGCCGTAATAGCATTTGCATGCTTAAATTTCAATCCTAGCTCTCGACCAACAATGAAATGTGTGTCACAAAGTTTTCTTTCTGAGCTTACACCATTAACCATTCCTTTGAGTGAAATTTCAATGGAGCAACTTATGAGTCAAGAACTCAAAACATTATTTCATATTGTCAACACATGA 2415 0.3565 MNLISNFVDKKMWMFIVLVLGLIVGTQSSTITPTLEMEANAILKSGWWDTSYEPFNFKCYCNWSNIICNKDRSIKSIHLDPQYSEVVRGYPKFATLNLSVFHNLESLVIKSIGLQGTIPKEIGLLSKLTHLDLSDNSLTGEVPSSLGNLRQLQYLDISYNGLYGLIPHEFGFIEHLIALNLSNNIIEGEIPSSLGNLTKLTHLDMSANSLVSMIPPSLGNLSLLEELDISRNYFEGFIPVELGFLKNLIRLDLSNNRLNRNLPISLSNLTQLYYLDISYNYLTGSLPSNFNQLTKLRVLLLNYNYISRTFSMINLSQLETLDISHNLLRGKLPSNFFPFQASIDLSYNLISGEIPSQLGHIFQFNLSNNNLTGMVPQSLCNVTILDISYNYLKGPIPFCIDPHKIIGNKDVCTDILDYQIRFQFQPCKKSNKANHNMVVVVVVPILMILMLSFLLLKCLKFRQNFIKNKHANTTTTTKNGDLFCLWNYDGKIAYDDIIKATEDFDMRYCIGTGAYGSVYKAQLPCGKIVALKKLHGYEAEVPSFDESFRNEVRILSEIRHKNIVKLYGFCLHKRVMFLIYQYMEKGSLFSVLYDDVEAMEFNWRKRLNIVKGVAFALSYLHHDCSPSIVHRDVSSNNILLNSDWQPTVSDFGTARLLQHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDIYSFGVVALECLMGRHPGEILSSLQLASTQSMKLCEVLDQRLPFPNNAMVLLDIIRVAVIAFACLNFNPSSRPTMKCVSQSFLSELTPLTIPLSEISMEQLMSQELKTLFHIVNT 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00702 804 Gene3D Ribonuclease Inhibitor 175 420 IPR032675 -
Trre14g00702 804 Pfam Protein kinase domain 510 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00702 804 Gene3D Phosphorylase Kinase; domain 1 464 582 - -
Trre14g00702 804 ProSitePatterns Tyrosine protein kinases specific active-site signature. 628 640 IPR008266 GO:0004672|GO:0006468
Trre14g00702 804 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 95 166 - -
Trre14g00702 804 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
Trre14g00702 804 PANTHER LEUCINE RICH REPEAT KINASE 2 100 773 - -
Trre14g00702 804 SMART LRR_sd22_2 315 338 - -
Trre14g00702 804 SMART LRR_sd22_2 197 223 - -
Trre14g00702 804 SMART LRR_sd22_2 125 151 - -
Trre14g00702 804 SMART LRR_sd22_2 245 271 - -
Trre14g00702 804 FunFam Leucine-rich repeat receptor protein kinase EMS1 167 263 - -
Trre14g00702 804 FunFam MDIS1-interacting receptor like kinase 2 583 777 - -
Trre14g00702 804 PRINTS Leucine-rich repeat signature 128 141 - -
Trre14g00702 804 PRINTS Leucine-rich repeat signature 315 328 - -
Trre14g00702 804 SUPERFAMILY Protein kinase-like (PK-like) 488 769 IPR011009 -
Trre14g00702 804 FunFam Leucine-rich repeat receptor protein kinase MSP1 467 582 - -
Trre14g00702 804 Gene3D Ribonuclease Inhibitor 33 174 IPR032675 -
Trre14g00702 804 ProSiteProfiles Protein kinase domain profile. 504 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00702 804 SMART LRR_typ_2 315 339 IPR003591 -
Trre14g00702 804 SMART LRR_typ_2 149 172 IPR003591 -
Trre14g00702 804 SMART LRR_typ_2 293 312 IPR003591 -
Trre14g00702 804 SMART LRR_typ_2 245 269 IPR003591 -
Trre14g00702 804 SMART LRR_typ_2 125 148 IPR003591 -
Trre14g00702 804 SMART LRR_typ_2 358 381 IPR003591 -
Trre14g00702 804 SMART LRR_typ_2 197 221 IPR003591 -
Trre14g00702 804 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Trre14g00702 804 SUPERFAMILY L domain-like 59 337 - -
Trre14g00702 804 Gene3D Transferase(Phosphotransferase) domain 1 583 777 - -
Trre14g00702 804 SUPERFAMILY L domain-like 314 398 - -
Trre14g00702 804 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Trre14g00702 804 Pfam Leucine rich repeat 271 328 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00702 Trre-Chr14 5865055 5867898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00702 104 676 Receptor kinase-like Gene Family AT4G08850 38.319 1.15e-124 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00702 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00702 - - mtr:25497510 911.368