Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00701 ATGAATTTGATTTCTAATTTTGTTGATAAAAAAATGTGGATGTTCATTGTTCTCGTATTGGGTTTAATAGTTGGGACTCAATCATCCACAATTACACCTACACTTGAAATGGAAGCAAATGCTATATTGAAGAGTGGATGGTGGGACACATCTTATGAACCTTTCAACTTCAAATGTTATTGTAATTGGTCTAATATTATTTGCAACAAGGATAGAAGCATTAAATCAATCCACTTAGATCCTCAGTATTCAGAAGTGGTGCGGGGCTATCCAAAATTTGCAACACTCAACTTGTCTGTTTTTCACAATTTAGAAAGCCTTGTTATCAAGTCAATTGGGCTACAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCCAAGCTCACTCATCTTGATCTATCTGACAATTCTCTTACAGGTGAGGTACCTTCTTCACTAGGCAACCTTAGACAATTACAGTACCTAGACATCTCTTACAATGGCCTTTATGGTTTGATTCCTCATGAGTTTGGATTCATTGAACATCTCATTGCATTAAATCTATCAAACAATATAATTGAAGGTGAGATTCCTTCTTCACTAGGAAATCTCACCAAACTCACTCATCTTGATATGTCTGCCAATTCTCTTGTAAGTATGATACCTCCTTCACTAGGAAATCTCAGCCTATTAGAGGAGCTAGACATTTCTCGCAACTACTTTGAAGGATTCATTCCTGTTGAGTTGGGGTTCCTGAAAAATCTCATTAGATTAGATCTATCTAACAATAGACTAAATAGAAACTTGCCCATTTCCCTTTCAAATCTCACACAATTATATTACCTTGACATCTCTTACAATTACCTCACTGGTAAACTTCCTTCAAATTTTTTTCCATTTCAAGCTTCCATTGACCTCAGTTACAACCTCATTAGTGGTGAAATTCCTTCTCAGCTTGGACATATTTTTCAATTTAATTTAAGCAATAATAATCTCACAGGAATGGTTCCCCAATCTCTCTGTAATGTCACTATTTTGGACATTTCCTACAATTATTTGAAGGGTCCTATTCCATTTTGTATTGATCCTCACAAGATAATAGGGAACAAGGATGTTTGTACTGACATTTTAGATTATCAAATCCGCTTCCAATTTCAACCATGCAAGAAAAGTAATAAAGCAAATCACAATATGGTTGTTGTTGTTGTTGTTCCTATCCTTATGATTCTAATGTTATCATTCTTACTTCTCAAGTGCTTGAAATTTCGTCAAAATTTTATTAAGAACAAGCATGCAAACACAACCACAACAACAAAAAATGGGGATTTGTTTTGCTTATGGAATTATGATGGAAAAATAGCATATGATGATATTATCAAAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCATGTGGAAAAATTGTTGCCTTAAAAAAACTTCACGGATACGAAGCAGAGGTTCCTTCTTTCGATGAAAGTTTTAGAAATGAAGTGAGAATATTATCAGAAATAAGACACAAGAATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAGTCATGTTTTTGATTTATCAGTACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTAGAAGCCATGGAATTCAATTGGAGAAAAAGGCTTAACATTGTTAAAGGAGTTGCATTTGCTCTATCTTATCTTCATCATGATTGCAGCCCTTCGATTGTGCATAGAGATGTATCGAGTAACAATATCTTGCTAAACTCTGACTGGCAGCCTACTGTTTCTGACTTTGGCACAGCTCGACTCCTTCAACATGATTCATCCAATCGAACAATAGTTGCTGGAACAATCGGATATATCGCTCCTGAGCTTGCTTATACCATGGTCGTGAGCGAAAAGTGTGATATATACAGCTTTGGGGTGGTGGCACTAGAATGTTTAATGGGAAGGCACCCTGGGGAAATATTGTCGTCACTTCAATTAGCATCAACTCAAAGCATGAAATTATGTGAAGTATTAGACCAACGTCTTCCATTTCCAAATAATGCAATGGTTTTACTTGACATAATTCGTGTAGCCGTAATAGCATTTGCATGCTTAAATTTCAATCCTAGCTCTCGACCAACAATGAAATGTGTGTCACAAAGTTTTCTTTCTGAGCTTACACCATTAACCATTCCTTTGAGTGAAATTTCAATGGAGCAACTTATGAGTCAAGAACTCAAAACATTATTTCATATTGTCAACACATGA 2277 0.3575 MNLISNFVDKKMWMFIVLVLGLIVGTQSSTITPTLEMEANAILKSGWWDTSYEPFNFKCYCNWSNIICNKDRSIKSIHLDPQYSEVVRGYPKFATLNLSVFHNLESLVIKSIGLQGTIPKEIGLLSKLTHLDLSDNSLTGEVPSSLGNLRQLQYLDISYNGLYGLIPHEFGFIEHLIALNLSNNIIEGEIPSSLGNLTKLTHLDMSANSLVSMIPPSLGNLSLLEELDISRNYFEGFIPVELGFLKNLIRLDLSNNRLNRNLPISLSNLTQLYYLDISYNYLTGKLPSNFFPFQASIDLSYNLISGEIPSQLGHIFQFNLSNNNLTGMVPQSLCNVTILDISYNYLKGPIPFCIDPHKIIGNKDVCTDILDYQIRFQFQPCKKSNKANHNMVVVVVVPILMILMLSFLLLKCLKFRQNFIKNKHANTTTTTKNGDLFCLWNYDGKIAYDDIIKATEDFDMRYCIGTGAYGSVYKAQLPCGKIVALKKLHGYEAEVPSFDESFRNEVRILSEIRHKNIVKLYGFCLHKRVMFLIYQYMEKGSLFSVLYDDVEAMEFNWRKRLNIVKGVAFALSYLHHDCSPSIVHRDVSSNNILLNSDWQPTVSDFGTARLLQHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDIYSFGVVALECLMGRHPGEILSSLQLASTQSMKLCEVLDQRLPFPNNAMVLLDIIRVAVIAFACLNFNPSSRPTMKCVSQSFLSELTPLTIPLSEISMEQLMSQELKTLFHIVNT 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00701 758 SUPERFAMILY L domain-like 263 355 - -
Trre14g00701 758 Gene3D Ribonuclease Inhibitor 240 294 IPR032675 -
Trre14g00701 758 ProSiteProfiles Protein kinase domain profile. 458 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00701 758 SUPERFAMILY Protein kinase-like (PK-like) 442 723 IPR011009 -
Trre14g00701 758 Pfam Protein kinase domain 464 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00701 758 FunFam MDIS1-interacting receptor like kinase 2 537 731 - -
Trre14g00701 758 PRINTS Leucine-rich repeat signature 128 141 - -
Trre14g00701 758 PRINTS Leucine-rich repeat signature 245 258 - -
Trre14g00701 758 SMART LRR_typ_2 149 172 IPR003591 -
Trre14g00701 758 SMART LRR_typ_2 312 335 IPR003591 -
Trre14g00701 758 SMART LRR_typ_2 245 269 IPR003591 -
Trre14g00701 758 SMART LRR_typ_2 125 148 IPR003591 -
Trre14g00701 758 SMART LRR_typ_2 197 221 IPR003591 -
Trre14g00701 758 ProSitePatterns Protein kinases ATP-binding region signature. 464 486 IPR017441 GO:0005524
Trre14g00701 758 PANTHER LEUCINE RICH REPEAT KINASE 2 100 727 - -
Trre14g00701 758 Gene3D Transferase(Phosphotransferase) domain 1 537 731 - -
Trre14g00701 758 FunFam Nuclear pore complex protein NUP107 32 191 - -
Trre14g00701 758 Gene3D Ribonuclease Inhibitor 295 374 IPR032675 -
Trre14g00701 758 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Trre14g00701 758 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Trre14g00701 758 Gene3D Phosphorylase Kinase; domain 1 418 536 - -
Trre14g00701 758 ProSitePatterns Tyrosine protein kinases specific active-site signature. 582 594 IPR008266 GO:0004672|GO:0006468
Trre14g00701 758 Gene3D Ribonuclease Inhibitor 35 239 IPR032675 -
Trre14g00701 758 SMART LRR_sd22_2 197 223 - -
Trre14g00701 758 SMART LRR_sd22_2 125 151 - -
Trre14g00701 758 SMART LRR_sd22_2 245 271 - -
Trre14g00701 758 FunFam Leucine-rich repeat receptor protein kinase MSP1 421 536 - -
Trre14g00701 758 SUPERFAMILY L domain-like 59 290 - -
Trre14g00701 758 FunFam Leucine-rich repeat receptor protein kinase EMS1 214 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00701 Trre-Chr14 5865055 5867898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00701 104 630 Receptor kinase-like Gene Family AT4G08850 40.835 9.50e-128 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00701 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00701 - - mtr:25497510 866.3