Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00681 ATGGGTTCCTTAAAAGAGAAACTAAAATCACTATACAAAAGTAGATGGTTTGTTTTTGTTGGAGCAATGTGGTTACAATCATGGGCTGGTATTGGTTATTTATTTGGAAGTATATCACCAGTTATAAAAAGATCATTAAATTATAACCAAAAACAACTTGCTATGTTAGGTGTTGCTAAAGACCTTGGTGATTGTGTTGGTTTTGTTACTGGTGTTTTATGTGAGATTTTACCTATTTGGGCTGCTTTATTTGTTGGTGCTTCTTTGAATCTTGTTGGTTATGGTTGGGTTTGGTTAATTGTTACAAGTAAAGTTCCTACTCTTCCTTTATGGGCTATGTGTATTCTTATATTCGTCGGAACAAATGGTGAAACCTACTTCAACACAGTTTCATTGGTGTCTTGTGTGCAAAATTTCCCAAAAAGCCGTGGTCCCGTCGTTGGAATTCTAAAGGGCTTTGCTGGATTGAGTGGTGCAATATTGACACAAATATATGCACTCATCCATTCCCCTGATCACGCATCATTGATATTTATGGTTGCAGTTGGTCCATCATTGGTAGCAATAGGTCTTATGTTCATTGTTAGACCAGTCGGAGGCCACAAACAAGTTCGGCCGTCGGACGGAAAATCGTTCACATTTGTTTATGGTGTATGCCTCCTTTTAGCAGCTTATTTGTTGGGAGTTATGGTTGTTCAAGATTTAGTTGATCTGAGTGAAACTGTTATCTCAATTTTTACGATTATCCTCTTTCTGATCCTCCTTGTTCCAATTGTAATTCCTCTGTCATTGACTTTCGGACCTGTCGAAAAGACTCTAGAGGAAGAAGCACTTCTTCTAGAACCACAAGAACAATCACAACATGATCCTGATGAAGTAATATTGAGTGAGTTGGAAGACGAGAAACCGAAGGAAGTGGACTTGCTACCTGCATTGGAAAGGCAGAAGCGTATAGCACAATTACAATCGAGATTACTACAAGCTGCTGCAGAAGGAGCTGTTAGGGTTAAGAGGAGGAGAGGACCACATAGAGGAGAAGATTTTACCTTGATGCAAGCTTTGATTAAAGCCGATTTTTGGCTTCTTTTCATTTCCATGGTTTTAGGTTCTGGATCTGGGTTGACTGTAATTGACAATCTCGGTCAAATGAGCCAGTCTTTAGGATATGACAATGCGCATATATTCGTCTCCATGATCAGTATTTGGAACTTTCTTGGACGTGTCGGAGGAGGCTACATATCTGAGCTTGTTGTCAAGGATCATACATATCCAAGACCAGCTGCATTAGCTGTATTTCAACTAATTATGACTATTGGTCATCTTTCCATCGGTATGGGATGGCCAGGTTCAATGTACATCGGCACTTTACTAGTTGGACTTGGTTATGGTGCTCATTGGGCAGTTGTTCCAGCTACAGCCTCCGAATTATTCGGTTTAAGAAACTTCGGTGCATTATACAATTTCATCACACTAGCAAACCCTATTGGAACTCTTGTCTTCTCAAGTCTCATTGCTAGCCGAATCTATGATCGTGAAGCGGAGAAACAAGCTCATGGCGGCCAACACCTTAATATAGGATCGTTTGTATCTCACACGCTTAATGTTAGTGAGCCGCTAAAGTGTGAAGGGTCAATATGCTTCTTCCTGACTTCATCTATCATGGCAGGATTCTGCATTGTTGCAGCAGGTTTAAGCATGTTTCTCGTCTTCCGAACAAGGATTGTTTATGCACATTTATATGGAAAGTCTTCTATGAGAAACCTTCGATGA 1770 0.4011 MGSLKEKLKSLYKSRWFVFVGAMWLQSWAGIGYLFGSISPVIKRSLNYNQKQLAMLGVAKDLGDCVGFVTGVLCEILPIWAALFVGASLNLVGYGWVWLIVTSKVPTLPLWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALIHSPDHASLIFMVAVGPSLVAIGLMFIVRPVGGHKQVRPSDGKSFTFVYGVCLLLAAYLLGVMVVQDLVDLSETVISIFTIILFLILLVPIVIPLSLTFGPVEKTLEEEALLLEPQEQSQHDPDEVILSELEDEKPKEVDLLPALERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISELVVKDHTYPRPAALAVFQLIMTIGHLSIGMGWPGSMYIGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPIGTLVFSSLIASRIYDREAEKQAHGGQHLNIGSFVSHTLNVSEPLKCEGSICFFLTSSIMAGFCIVAAGLSMFLVFRTRIVYAHLYGKSSMRNLR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00681 589 CDD MFS_Mch1p_like 14 562 - -
Trre14g00681 589 Gene3D MFS general substrate transporter like domains 321 525 IPR036259 -
Trre14g00681 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 577 - -
Trre14g00681 589 SUPERFAMILY MFS general substrate transporter 5 200 IPR036259 -
Trre14g00681 589 Pfam Nodulin-like 15 262 IPR010658 -
Trre14g00681 589 SUPERFAMILY MFS general substrate transporter 212 573 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00681 Trre-Chr14 5659054 5663401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00681 3 583 Nodulin-like Gene Family AT5G14120 69.795 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00681 - - aprc:113861924 981.859