Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00675 ATGAGCCCACATGTTCCAAAGAAGGGGCTTGTAGGAATTACTCGACACATGGCACATGTCGAATCATTGTTATGCACTGGAGCAGCTGATCTACGGATTATTGGTATTTGGGGTATGGGTGGTATAGGAAAGACAACCATTGCAGAGGCTATATATACAAAAGTCTCTTCTCAATACGAGGGATGCTACTTCGCTGCTGATGTGAGGGAAAAATGGAAATATTCTAGAAAAAATGAGTTGCGGACTAAACTTCTGGCTGGTGTATTAGGGGACCAAAACTTGGATATTACTATAAGTTCCACTTTTGTTGTAGGAAGGCTTCGACATAAAAAGCTTCTCATTGTTCTCGATGACATAAGTGATTCGAAACAACTAGAATATCTTGTTGGTGAGAAAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACGACCAGAAATAAAGAAGTGTTTAACAGTGGAGTTGATGAATTATACCAAGTGGGGGTATTGAGTTCTCATGAATCACTAAAGCTTTTTAGCTTGAATGCCTTTCAACAAGACCATCCAATGAGGGAATACCAACACTTGTCAGACAGGGCCGTAGATTATGCTAAGGGCAATCCTCTAGCTCTTAAAATTCTGGGTTCCCATCTTTGTACCAAACTACCAAAAGAATGGGAGAGTGCACTGGAGAAACTGAAGAAAATTCCCAAAACTGAAATTTATGATGTGCTAAGGTTGAGTTATGAAGGATTAGACCCTGAAGAGCAGAATATATTTTTAGATATTGCCTGCTGTTTGAAAGGAGAATCAAAATGCAGTATAACAAGAATATTAGAAGGCTGCGGTTTTTCTACCGAAATTGGGATGAGAAGCCTTGAAGATAAGTCTCTTGTAACCATTTCCAAAGGCAACGAGGTACAGATGCATGATCTGATACAAGAGATGGGTTGGCAAATAGTTCGTGAAGAATCTATAAAAGAGCCTGGAAAACGAAGTCGATTGTGGGATGCTAAAGAAATTTATGATGTCCTCAAGTACAACATGGGTACTGACAGTATTGAGAGCATAGCATTGGACATGTCTCAAATCAAAGAAGTGACAATAAGGCCTCGTACTTTTGACAGAATGTACAAGCTAAGGCTTTTGAATTTTTATGTGCCCTCACATGGTAAGAGAAGAACCAATGTGCATATTTCCAGAAGTCTCGAGTGTTTGCCGGATGAATTGAGTTATCTCCGATGGGACTTTTTCCCATTGAAATCCTTGCCACCATCGTTTTGTGCAGAGAAGCTTGTTGAACTTGATCTAAAACATAGCCTTGTTGAAAAGCTATGGAATGGAGTGCAGGATCTTGTGAATTTGAAGTTATTGTACCTTGATGGTTGCAAGCACCTGATTGAGCTCCCAGATTTGTCTTTGGCTTCAAAGCTTGAAGAAGTGCATCTTGATGATTGTACAAGCTTGTTGCATGTTCCTTCATCCACTTTGTCACTTGATAGTCTTTTCGCACTAAATCTGAGAGGCTGTTACGAGCTTCGATACATTCAAAGTGAGAAACAGTCTAGATCGCTTAAATGGCTCAATCTTAGAGGATGCTCAAGACTTGTAAAATATTCAGTTATTTCAGAGAAATTGGAATATTTGAACTTAGATGACACGGCAATTAAAGAACTGCCTTCATTAGTTATTGGTTTAGATTGTAGCATCCAGCTTCTTGACTGCCCAAAACTTGAGAAATTACCTGCAACGTTTGATTCCTCATTGTCCATTACTTCGCTCTGTCTAGATAATTGTTTAAATTTATCAGAACTCCCTGACAACCTTGGCCTCTTGTCAAAATTAAATAAACTATCATTAAGAGGAAGCAATATTGGGAACTTGCCTGATAGCATAAAATATCTTTCACAGTTAAGAGATCTCAATGTGAGCAACTGTAGGAGGCTCCGTTCCTTGCCCGAGCTTCCATTCTTTTTACAAGACTTGAATGCAAGTAATTGCATTTCCCTAGAAACAGTATCCAGCTTAGGGATCTCAGTTTCGAAAGATTCATTTGATAAGGTGAAGGAGATATCATTTCTCAGACAGATTCAAGAGAAAGAAAAAATGTCTATTCGCCATCGTGAGTATTTGGGAAGATTTGAGTTCAATAAGTGCATAAAATTGGATCAGATTGCATGCAAAGCTATTATGGTAGAGGCTCTGATTATAATTCAGCTAGCAGCCAGCCTGTCCTCAACGATTGATGATTGTAATGATCCTTACAGTCAAACCAGGGAAAATACTAAGAATTTTGACCCTGAAGATCTTGTATATATCTCCCGTCCGGTTTATATTATTTTACCAGGAAATGAAATCCCAGATTGGTTCACAGTTAAAAGAACAGACTCCTCTATCATAACAATTAAACTTTCTTTTTGCAAAGTCCCGGGTTTTGCTTTTTGCCTTGTTGTTGGACAATCTGACTCAAACAGGAAGAAAATTTGTCGTACTGGTTTTGTGGCAGGGTGTAGATGCTATGTTAAGGGAAATTATGCTGGAACTTGCATTATGAAGTCTTCTTTCACTGATGCCAAATCAGATCAGGTATGGCTGTGGTATGACCAGATTTTAAACGTTGTAAAAGTGAGCGATATACATTCAGATGCGGTCTCCTTTAAGTTTTTTGTCAGGCCTGGTAGTTCAGGATTTGTTGTGAAACAGTGCGGAGTTCGACCATTTTATGCTCCATTAGACACTATGCAAAGCTCAAGCAAAGAAGCAGCTATCAGAGAAGGTAAGAGAGCATATGATGAGTTTGAAGACAACAAAGCTCCAAATACTTATACCCTTATTCGCCCATATGCTTGTCCTCGTGACATGGGCTTTGAATTGTCATTAAAAGAAAGGATTTCAAGGTATCACGATGGACATTTTGGGAAATCCATCCCATCAATTTCTTGTGCCACAAATGTTGTTTACCTTCAAATGCAACATGATCACTTTGATAATTGTGACGAAGTAATTGTTAGGTTTGACCTTGGTGGTGGTAGTCCCCAGCCACTGCATGAACTGCGTTATTTAGCATGGCAACTTCAGGATTACTATTGTTATTTTGGTGAACTTGTACTAAAGAGATTGTCTCTAAATGGTTGCAATATTGAAAGCTTGGCTGCTGGCATCAAGCATCTTTCAAGTCTGGAACATCTTTCATTGACGTCCTGCAAGAGGCTTATGTCTCTCTCCAATCTTCCACCATCCCTTTGGAGATTGTCTATCATTGAGTGCATGTCTCTGGAGACAGTTGAATTTGCTGAGGAAAAGACCATATTTGTTGGAATATCCAATCAAATGGTGTATGAGAAAGTATCGAGAATACAAGTTACTGACCCAGGAGCAAGTGTCACAGACTGGTACAGTCAAATTTTATGGCCAGGCCTAGGAGGTTCAATGTTGATTGTGTTCAATGTTGCTTCAATTTTAACCAACTCACTGAATTCCATTTGCGTAGGTGATACGTTAAAAGTTACCATCACGTGA 3501 0.3922 MSPHVPKKGLVGITRHMAHVESLLCTGAADLRIIGIWGMGGIGKTTIAEAIYTKVSSQYEGCYFAADVREKWKYSRKNELRTKLLAGVLGDQNLDITISSTFVVGRLRHKKLLIVLDDISDSKQLEYLVGEKDWFGPGSRIIVTTRNKEVFNSGVDELYQVGVLSSHESLKLFSLNAFQQDHPMREYQHLSDRAVDYAKGNPLALKILGSHLCTKLPKEWESALEKLKKIPKTEIYDVLRLSYEGLDPEEQNIFLDIACCLKGESKCSITRILEGCGFSTEIGMRSLEDKSLVTISKGNEVQMHDLIQEMGWQIVREESIKEPGKRSRLWDAKEIYDVLKYNMGTDSIESIALDMSQIKEVTIRPRTFDRMYKLRLLNFYVPSHGKRRTNVHISRSLECLPDELSYLRWDFFPLKSLPPSFCAEKLVELDLKHSLVEKLWNGVQDLVNLKLLYLDGCKHLIELPDLSLASKLEEVHLDDCTSLLHVPSSTLSLDSLFALNLRGCYELRYIQSEKQSRSLKWLNLRGCSRLVKYSVISEKLEYLNLDDTAIKELPSLVIGLDCSIQLLDCPKLEKLPATFDSSLSITSLCLDNCLNLSELPDNLGLLSKLNKLSLRGSNIGNLPDSIKYLSQLRDLNVSNCRRLRSLPELPFFLQDLNASNCISLETVSSLGISVSKDSFDKVKEISFLRQIQEKEKMSIRHREYLGRFEFNKCIKLDQIACKAIMVEALIIIQLAASLSSTIDDCNDPYSQTRENTKNFDPEDLVYISRPVYIILPGNEIPDWFTVKRTDSSIITIKLSFCKVPGFAFCLVVGQSDSNRKKICRTGFVAGCRCYVKGNYAGTCIMKSSFTDAKSDQVWLWYDQILNVVKVSDIHSDAVSFKFFVRPGSSGFVVKQCGVRPFYAPLDTMQSSSKEAAIREGKRAYDEFEDNKAPNTYTLIRPYACPRDMGFELSLKERISRYHDGHFGKSIPSISCATNVVYLQMQHDHFDNCDEVIVRFDLGGGSPQPLHELRYLAWQLQDYYCYFGELVLKRLSLNGCNIESLAAGIKHLSSLEHLSLTSCKRLMSLSNLPPSLWRLSIIECMSLETVEFAEEKTIFVGISNQMVYEKVSRIQVTDPGASVTDWYSQILWPGLGGSMLIVFNVASILTNSLNSICVGDTLKVTIT 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00675 1166 Pfam C-JID domain 775 903 IPR045344 -
Trre14g00675 1166 SUPERFAMILY RNI-like 1009 1086 - -
Trre14g00675 1166 Gene3D - 3 156 IPR027417 -
Trre14g00675 1166 Pfam NB-ARC domain 17 230 IPR002182 GO:0043531
Trre14g00675 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 257 IPR027417 -
Trre14g00675 1166 SUPERFAMILY L domain-like 302 668 - -
Trre14g00675 1166 Gene3D Ribonuclease Inhibitor 536 767 IPR032675 -
Trre14g00675 1166 Gene3D Ribonuclease Inhibitor 961 1097 IPR032675 -
Trre14g00675 1166 Gene3D Ribonuclease Inhibitor 337 535 IPR032675 -
Trre14g00675 1166 PRINTS Disease resistance protein signature 33 48 - -
Trre14g00675 1166 PRINTS Disease resistance protein signature 106 120 - -
Trre14g00675 1166 PRINTS Disease resistance protein signature 627 643 - -
Trre14g00675 1166 PRINTS Disease resistance protein signature 198 212 - -
Trre14g00675 1166 Gene3D - 163 247 IPR042197 -
Trre14g00675 1166 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 665 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00675 Trre-Chr14 5606034 5609740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00675 7 642 WRKY Transcription Factor Family AT4G12020 37.692 2.17e-109 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00675 - - tpra:123891409 1910.19