Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00666 ATGTTGTTTCCTTGTCCTCCTTCTTCTTCTAGCTACCAAAATCCAATTACAAGTGGTTTGAATAATGGTCAAAGTTCAAATGCATTTCTTGGTTTGAAGACTAATAATAATGATGAAATTATTAGTGTTAATCATGATCATCATGAAGATGAAAAAAGAGGTGAAGGGAGTGTTAATGATCAACAAGGTGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGAAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGTTACTATAGGTGCACACATCAAGGATGCAATGTAAAGAAACAAGTGCAACGCTTAACCAAAGATGAGGGAGTAGTTGTGACAACTTATGAAGGAGTGCATACTCACCCTATTGAGAAGACAACCGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 504 0.3452 MLFPCPPSSSSYQNPITSGLNNGQSSNAFLGLKTNNNDEIISVNHDHHEDEKRGEGSVNDQQGVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00666 167 SUPERFAMILY WRKY DNA-binding domain 80 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g00666 167 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 150 IPR044810 GO:0003700
Trre14g00666 167 MobiDBLite consensus disorder prediction 1 33 - -
Trre14g00666 167 FunFam WRKY transcription factor 57 74 148 - -
Trre14g00666 167 Pfam WRKY DNA -binding domain 89 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00666 167 MobiDBLite consensus disorder prediction 46 77 - -
Trre14g00666 167 SMART WRKY_cls 88 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00666 167 ProSiteProfiles WRKY domain profile. 83 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00666 167 MobiDBLite consensus disorder prediction 46 67 - -
Trre14g00666 167 Gene3D WRKY domain 73 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00666 Trre-Chr14 5493336 5497240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00666 19 167 WRKY Transcription Factor Family AT5G13080 63.087 5.48e-60 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g00666 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00666 - - psat:127128225 252.677