Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00665 ATGGAAAACAATTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCTTCTAGCTACCAAAATCCAATTACAAGTGGTTTGAATAATGGTCAAAGTTCAAATGCATTTCTTGGTTTGAAGACTAATAATAATGATGAAATTATTAGTGTTAATCATGATCATCATGAAGATGAAAAAAGAGGTGAAGGGAGTGTTAATGATCAACAAGGTGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGAAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGTTACTATAGGTGCACACATCAAGGATGCAATGTAAAGAAACAAGTGCAACGCTTAACCAAAGATGAGGGAGTAGTTGTGACAACTTATGAAGGAGTGCATACTCACCCTATTGAGAAGACAACCGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 522 0.3429 MENNYSMLFPCPPSSSSYQNPITSGLNNGQSSNAFLGLKTNNNDEIISVNHDHHEDEKRGEGSVNDQQGVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00665 173 Gene3D WRKY domain 79 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g00665 173 FunFam WRKY transcription factor 57 80 154 - -
Trre14g00665 173 Pfam WRKY DNA -binding domain 95 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00665 173 ProSiteProfiles WRKY domain profile. 89 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00665 173 MobiDBLite consensus disorder prediction 1 39 - -
Trre14g00665 173 SMART WRKY_cls 94 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00665 173 MobiDBLite consensus disorder prediction 52 73 - -
Trre14g00665 173 MobiDBLite consensus disorder prediction 52 82 - -
Trre14g00665 173 SUPERFAMILY WRKY DNA-binding domain 86 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g00665 173 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 156 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00665 Trre-Chr14 5493318 5497240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00665 25 173 WRKY Transcription Factor Family AT5G13080 63.087 5.64e-60 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g00665 WRKY 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00665 - - psat:127128225 264.233