Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00664 ATGGCGAACTCTTTTCATCCACTTTCTCTTTCTCAATCGCATTTTCCCTCTCTTCCTCATTGCACTTTCAAATCCTCCACCACTCGCTGCAATTACTCATCTCTTGAAGTTAGAGATGTTAGTTATCAACCTCCAGGGACTCAGCTTAAGCTTCTCAATTCAGTTAATTTCTCACTTCCGGAGAAAAGTTTAGGTCTAATTTTCGGGCAGAGTGGAAGCGGAAAAACAACTCTCTTGCAGCTCCTTGCAGGAATAAACAAACCAACATCTGGATCTATTCACATTCAAAAATACGGGGATGATGGGAATCCTAGTCAATCTCCGGAGCCCTTGGTGCCGGAAAGGGTTGGTATTGTCTTCCAGTTTCCGGAGAGGTATTTTGTTGCTGATACTGTACTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAGTGATCAATTAAGGGAGAATCTTGCTCTAGGGCTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATACCATTGGATAAGAATCCTCACTCCCTCAGTGGTGGTTACAAGCGTCGCCTTGCTTTGGCAATACAATTGGTGCAAATCCCCGATTTATTAATATTGGATGAACCTCTTGCCGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTATTAAAGCATCTAAAAAAAGAGTTAACTGTGCTAGTTGTCAGCCATGACTTGAGTGAGTTTGCAAGTCTAGTTGATCAATCATGGAGGATGGAAATGGGTGGAAATCTTAGACAGGAGCTTCTACCATTATAA 789 0.4297 MANSFHPLSLSQSHFPSLPHCTFKSSTTRCNYSSLEVRDVSYQPPGTQLKLLNSVNFSLPEKSLGLIFGQSGSGKTTLLQLLAGINKPTSGSIHIQKYGDDGNPSQSPEPLVPERVGIVFQFPERYFVADTVLDEVTFGWPRQKGSDQLRENLALGLQRAINWVGLSGIPLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLSEFASLVDQSWRMEMGGNLRQELLPL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00664 262 Gene3D - 20 260 IPR027417 -
Trre14g00664 262 FunFam ABC transporter I family member 11 chloroplastic 24 260 - -
Trre14g00664 262 Pfam ABC transporter 52 205 IPR003439 GO:0005524
Trre14g00664 262 SMART AAA_5 61 253 IPR003593 GO:0016887
Trre14g00664 262 PANTHER HEAVY METAL TRANSPORTER 34 258 - -
Trre14g00664 262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 262 IPR003439 GO:0005524
Trre14g00664 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 252 IPR027417 -
Trre14g00664 262 CDD ABC_cobalt_CbiO_domain1 36 252 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00664 Trre-Chr14 5465404 5470141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00664 35 237 Calmodulin-binding Proteins AT2G36910 26.190 4.46e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00664 - - vun:114196181 413.305