Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00657 ATGGATCCCAAAAACTCAAAACAAACACAACTTGCAAACAACAACAACAACAACATGGGAGAAAACAAACAACAATCTGATTCAAAAAACCTTCAAATTGTGTTATCTGAAACAAACAACAACAACAAAGATTCAGAAACAAAAAAACAACTAGCACCAAAAAGAACATCAAACAAAGACAGACACACAAAAGTTGAAGGAAGAGGTAGAAGAATAAGGATGCCAGCTTTATGTGCTGCTAGAATTTTTCAACTCACAAGAGAATTAGGTCATAAATCAGATGGTGAAACAATTCAATGGCTTCTTCAACAATCTGAACCATCAATTATTGCTGCAACTGGAACAGGAACAATTCCTGCTTCAGCTTTATCTTCATCTTCAAACACTTTAACAACAACAAACCAAGTTTCATCTTTATCTTCTGGTTTACAACTTGATAGAACTAATTGGGCTCAGGCCCATCATCAACAAGCCCATCAACAACAAGCCCATCATGTTACTTCATCAAGTTTATGGCCTCATCATCATGGATTTGGTTTTCAATCATCATCATCATCTACTAGTGAAAATAATAATAATAATAGTTCAAATTATTTTCAAAAAATTGGTTTTTCTGGTTTTGATATGCCAACATCAGCAACTAATTTGGGTGGAATGAGTTTTACATCAATTTTGGGTGGAAATCAACAGATGCCTGGTTTGGAATTAGGATTATCACAAGATGGACATATTGAGTTTGAAGAAATAGAGAAGCTCAATAGAAAATGGATTTTGTTTACAAGGTGGAATTGGATGGTCAGAGATATAGCAGTGCTTACACTCTAA 825 0.343 MDPKNSKQTQLANNNNNNMGENKQQSDSKNLQIVLSETNNNNKDSETKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALSSSSNTLTTTNQVSSLSSGLQLDRTNWAQAHHQQAHQQQAHHVTSSSLWPHHHGFGFQSSSSSTSENNNNNSSNYFQKIGFSGFDMPTSATNLGGMSFTSILGGNQQMPGLELGLSQDGHIEFEEIEKLNRKWILFTRWNWMVRDIAVLTL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00657 274 ProSiteProfiles TCP domain profile. 58 112 IPR017887 -
Trre14g00657 274 MobiDBLite consensus disorder prediction 42 71 - -
Trre14g00657 274 MobiDBLite consensus disorder prediction 1 71 - -
Trre14g00657 274 Pfam TCP family transcription factor 56 167 IPR017887 -
Trre14g00657 274 MobiDBLite consensus disorder prediction 1 41 - -
Trre14g00657 274 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 191 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00657 Trre-Chr14 5411174 5413007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00657 1 244 TCP Transcription Factor Family AT3G27010 49.097 3.92e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre14g00657 TCP 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00657 - - psat:127128219 308.145