Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00649 ATGTATTTCTTATCAAACCTTGATCAAAACATTGCTGTAATTGTAAGAACTGTTTATTGTTTTAAAAATGAAGAGAAAGGAAATGAGAATGCTAATGAAGTGATTAAGAATGCATTAAAGGATGTTCTTGTATATTATTATCCTCTTGCTGGTAGATTAAGTATAAGCTCAGAGGGTAAACTCATTGTGGATTGTACTGGAGAAGGTGCTCTTTTTGTTGAAGCTGAAGCTAATTGTTCAATGGAAGAAATTGGTGATATTACAAAACCTGATCCAAGGACTCTTGGTATGTTGGTTTATGATATTCCTGCTGCTAAACATATTCTTCATATGCCTCCTTTGGTTGCTCAGGTAACCAAGTTTAAATGTGGAGGTTTTTCTCTTGGACTATGCATGAATCATTGCATGTTTGATGGCATTGGAGCTATGGAGTTTGTGAACTCATGGGGAGAATTAGCAAGAGGCCAACCACTCTCAATCCCTCCAATTCTAGACAGAACCATTCTAAAGGCACGCAATCCGCCAAAGATAGAACATTTGCACCAAGAATTTGCTGACATTGAAGACAAATCAAATACAAATAGCTTATATGAAGATGAAATGGTGTATAGATCATTTTGTTTTGATCTTGAGAAACTAAAAGAATTGAAGAAAAAAGCTATGGAAGATGAAAATGGTGTTCTTCAATCTTGCACAACATTTGAAGTTCTTTCAGCATTTGTTTGGATAGCTAGAACAAAAGCACTTAAACTTTTGCCAGAACAAGAAACTAAGCTTCTTTTTGCTGTTGATGGAAGGGCTAAATTTGAACCAAAACTTCCAAAAGGGTATTTTGGGAATGGAATTGTTCTAACAAAATCGGTTTGTAAAGCAGGTGAAATTACGAACAAGCCCTTATCGTATACGGTGAAGGCTATACAAGAAGCAATTAAGAGTGTCACAGATAGTTACATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGGCCTTCTTTGGCTTGTACACTTTTGATCACGACTTGGTCGCGACTTCCGTTTCATACCACCGATTTCGGTTGGGGAGAACCTGTTCTGTCGGGACCGGTTTCGTTGCCCGAGAAGGAAGTGATTTTGTTCCTTTCACATGGTCAAGAGAGGAGAAGCATCAATGTGCTTCTTGGTTTACCTGCTCCTGTCATGAAGATCTTTCAAGATTTGATGCAGATATAG 1215 0.3745 MYFLSNLDQNIAVIVRTVYCFKNEEKGNENANEVIKNALKDVLVYYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPRTLGMLVYDIPAAKHILHMPPLVAQVTKFKCGGFSLGLCMNHCMFDGIGAMEFVNSWGELARGQPLSIPPILDRTILKARNPPKIEHLHQEFADIEDKSNTNSLYEDEMVYRSFCFDLEKLKELKKKAMEDENGVLQSCTTFEVLSAFVWIARTKALKLLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIVLTKSVCKAGEITNKPLSYTVKAIQEAIKSVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLPFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGQERRSINVLLGLPAPVMKIFQDLMQI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00649 404 Gene3D - 184 403 IPR023213 -
Trre14g00649 404 FunFam Spermidine hydroxycinnamoyl transferase 1 184 - -
Trre14g00649 404 Pfam Transferase family 3 401 - -
Trre14g00649 404 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 400 - -
Trre14g00649 404 Gene3D - 1 183 IPR023213 -
Trre14g00649 404 FunFam Tryptamine hydroxycinnamoyl transferase 188 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00649 Trre-Chr14 5328313 5330455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00649 17 402 Monolignol Biosynthesis Gene Families AT5G48930 35.750 3.83e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00649 K15400 - gmx:100804504 699.893