Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00645 ATGGCATCTCAATCCTCCAGCAGCTCTTCCACTTCACAACATCAAGATGCGAACAAACAAAATCAACACCCAAACTCTAATTCGAACAATCTTGACTTCGTAAAGTTATCGAAAGATGATTTGGTTCATGGGTCTAACGTGAAAGAGTACAACTTTTTTGGCCCTATTCAAGTTGGTTCTTCATCTTGTTTTCCAAATAACAACGATGAAGGAATAAATGAGAGCAACGATGAAAACAAGAATTCTGATTCAAAGTCTTATCTATGCTCTTACTGTCCGGGCCAATATTCCTCTTTACAAGCATTAGGAGGGCACCAACATGCCCACAAAGCAGAACGCGCATTACAAATGCAACTAATTAAGCAAAAGTATGATGGCGGTGCTTTTAATTTAGGGCAACCTCGTTTTAATCCTTATTTAAATTATCCTATTACTCCTTTTTCACCATATAACTATAGGCCACTTGGAGTTAGAATTGAATCAATGATTCAAAAATTGCCTAATTCAATTAGCCCTAGGATTGGTCTTGGTGCTTTGCATTTGCATGATATATTAAACCCTTCTCTTGTTAGCATGAGAAATAATATTGAGGGAAGTACCAGTGGGGTTGCAAGTCTAGGTATTGGTGGTGCAACTACTTCTACAAATATCATTGCTCCTACTTCTATCATGGATGGGATTCGCAGGTTAAAGTCAAGTGATTTTGATTCTTCTGGACTTGATCTGTCACTTAAGTTTTAA 741 0.3752 MASQSSSSSSTSQHQDANKQNQHPNSNSNNLDFVKLSKDDLVHGSNVKEYNFFGPIQVGSSSCFPNNNDEGINESNDENKNSDSKSYLCSYCPGQYSSLQALGGHQHAHKAERALQMQLIKQKYDGGAFNLGQPRFNPYLNYPITPFSPYNYRPLGVRIESMIQKLPNSISPRIGLGALHLHDILNPSLVSMRNNIEGSTSGVASLGIGGATTSTNIIAPTSIMDGIRRLKSSDFDSSGLDLSLKF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00645 246 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 194 IPR044246 GO:0009788
Trre14g00645 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Trre14g00645 246 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Trre14g00645 246 MobiDBLite consensus disorder prediction 64 84 - -
Trre14g00645 246 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00645 Trre-Chr14 5313034 5313774 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00645 69 166 C2H2 Transcription Factor Family AT5G25160 33.333 4.51e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00645 - - tpra:123892086 264.618