Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00641 ATGGCTTCCCAATCCTCTAGCAGCTCTTCCAATGTACAACATCTTAACAAACAAAATCAACTTCCAAGCTCCAATTCTGTAGTGCAAGAGCACAATTTTTTCAGCCATGTGCAAGTTGGTTCTTCATCTGCTTTTCCTAATAACAATGAAGGAAAAGATGAGAACACCAACGAAAAGAAAAATCCCGATTCAAAGATTTATTCATGCAACTACTGCAAGGGTCAATATTCTTCTTTACAAGCATTAGGAGGGCACCAAAATGCCCACAAAGCAGAACGTGCGTTACAAATGCAACTAATCAAACAAAAGTATGAAGGTAGTGCTTTCAATTCCGAACAATCTCGTTTCAACCCTTATTCAAATTCTTCTATTACTCCTTTTACGCCTTATAACTATATGCCACATGGATCTAGAATTGGTCATGGTACTTTTAATCCTTATAACTATAAGCCACTTGGGGTTAGAATGGAATCATCCATTCAAAAATCACCTTGTATTAGCCCTAGAATTGGTCTTGGTGCTTTGCCTTTGCATGATATATTAAACCCTTCTCTTGTTAGCATGAGAAATAATATTGAGGGAAGTAATGGTGGGGCTGCAAGTCTAGGTATTGGTGGTGCAACTACTGCTACAAATATTGTGGCTCCTACTTCTACCATGGATGGCATTCGCAAGTTAAAGTCAAGTGATTTTGATTCTTCTGGACTTGATCTGTCACTCAGGCTTTAA 729 0.3827 MASQSSSSSSNVQHLNKQNQLPSSNSVVQEHNFFSHVQVGSSSAFPNNNEGKDENTNEKKNPDSKIYSCNYCKGQYSSLQALGGHQNAHKAERALQMQLIKQKYEGSAFNSEQSRFNPYSNSSITPFTPYNYMPHGSRIGHGTFNPYNYKPLGVRMESSIQKSPCISPRIGLGALPLHDILNPSLVSMRNNIEGSNGGAASLGIGGATTATNIVAPTSTMDGIRKLKSSDFDSSGLDLSLRL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00641 242 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Trre14g00641 242 MobiDBLite consensus disorder prediction 40 64 - -
Trre14g00641 242 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Trre14g00641 242 MobiDBLite consensus disorder prediction 1 27 - -
Trre14g00641 242 SUPERFAMILY beta-beta-alpha zinc fingers 64 95 IPR036236 -
Trre14g00641 242 Pfam C2H2-type zinc finger 67 91 - -
Trre14g00641 242 Gene3D Classic Zinc Finger 48 120 - -
Trre14g00641 242 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 242 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00641 Trre-Chr14 5295799 5296527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00641 63 162 C2H2 Transcription Factor Family AT1G80730 36.000 3.48e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00641 - - tpra:123892087 223.787