Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00638 ATGATCAATTCACTTTGTGGAAGCTCAAATTCCCACAAAGAAAAATGTCTTCAACCCACTTCTTCAAATCATACAAATATACACTCAAAGAAAAATACCACAAATTCTAGTGATGATTTAGATCAAATTAATATTTTAACCCCACAAAGCTTAAACCTTCCATCACTCAAATTTGACTTAGATGGTGACGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAATCATTTTTCAATGACCATTTAGATATTAATAATGATTTTATGATATCTTCACCTATTAGAAATATTAACCCTAACTCACCACAAGCTTCTACTTACAATAATAATTGTAGTAATTATAATAATAATAGTAACTATGCTCAAGGAATGCAAATTCAAACTTTTTCACCACCTCGTTTTGCATCACATATTGGAGCATTAAATAATAGTAGTAGTAATAGTAATAATCAACAAAAAGGGAAAGGACTTAGTCCACTTCATAGAGTTTTTAATTCACCAAATAATCAATATATGCAACATGTTGAAAATCTTTCTTTGCCAGCTATTGAAGAGTTCTTAGAAGATTATCAAGGTGATGTTGATTTTTCATCAACTAAAATATCTTCTTCTGATCAATGTTTTGATATGGAAACTCCAATTTCAACAATTTTGGATAGTTTATCAATGCAAAATTCATCATCATCAAGGTATTGTGGTTCTATTAGTGAAGAATCCTCAGTTTTGCATGGTGGTAATTCTTCACAAGAGAATGATATTTATCATCAAATGGGATCTATGGCAAGTGCATCACTTTCACAAGCTTTACAACAAGAAAGGTATCAAGAGAAACATCAAAAATTGCAAGCACAACAACAGAGTCTAACAGTTCCTATTCCAATTGGAATTGAACAGGAACAAGACAGTGGACTTCAACTGGTGCACTTGCTTCTAGCTTGTGCGGAAGCAGTAGCAAAGGAAGAATATATGCTAGCAAAAAGGTACCTACATCAGCTCAATAGAGTAGTAACACCATTAGGTGACTCCATGCAACGTGTAGCTTCATGTTTTACAGAATCTCTAAGTGCAAGACTCGCCGCAACCCTAACAACAAAGACATCATCAAACAAAAAGTCAACAACACCATCATCATCAACATCCTCCTCATCATCATGTTTTTCTAGCTTCCCATCAAACCCTATGGAAGTCCTCAAGATCTACCAAATAGTCTACCAAGCTTGTCCTTACATCAAATTTGCACACTTCACAGCTAACCAAGCGATTTTCGAGGCATTTGAGGCCGAAGAGCGGGTTCATGTTATTGACCTAGATATTCTCCAGGGTTACCAATGGCCTGCTTTTATGCAGGCATTGGCTGCACGGCCTGGCGGTGCTCCGTTTCTCCGGATCACCGGGGTAGGGCCGTGCCTTGAAGCTGTTAGAGAAACTGGACGATGCTTAACTGACTTAGCTCATTCTCTTCGTATCCCCTTCGAGTTCCACTCAGTTGGAGAACAACTTGAGGATCTAAAACCGCACATGTTTCACCGCCGTGTAGGAGAAGCATTAGCGGTTAACACCGTTAACCGGCTTCACCGTGTTCCTGGAAATCATCTTGGGAATTTGTTGTCCATGATAAGGGACCAAGCACCGAACATAGTGACGCTTGTCGAGCAAGAAGCAAGCCATAATGGACCATACTTTTTGGGCCGATTTCTCGAGGCCTTGCATTACTACTCAGCGATTTTCGACTCCTTGGATGCAACTTTTCCGGTGGAGTCGGCACCTAGGGCAAAAGTGGAGCAGTATATATTTGCACCGGAGATTCGGAACATTGTGGCATGTGAAGGGGAGGAGAGGATAGAGAGGCATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTTCCTTTAAGTCCTAATGCGGTGACTCAATCAAGGATATTGTTGGGTTTGTATTCATGTGATGGTTATAGGTTAACTGAGGATAAGGGTTGCTTGTTGCTTGGGTGGCAAGACAGAGCCATCATCGCAGCTTCTGCATGGCGATGCTGA 2052 0.3986 MINSLCGSSNSHKEKCLQPTSSNHTNIHSKKNTTNSSDDLDQINILTPQSLNLPSLKFDLDGDVEVQSPDSSMWESFFNDHLDINNDFMISSPIRNINPNSPQASTYNNNCSNYNNNSNYAQGMQIQTFSPPRFASHIGALNNSSSNSNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGDVDFSSTKISSSDQCFDMETPISTILDSLSMQNSSSSRYCGSISEESSVLHGGNSSQENDIYHQMGSMASASLSQALQQERYQEKHQKLQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLAKRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKTSSNKKSTTPSSSTSSSSSCFSSFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCLEAVRETGRCLTDLAHSLRIPFEFHSVGEQLEDLKPHMFHRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00638 683 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 246 677 IPR005202 -
Trre14g00638 683 MobiDBLite consensus disorder prediction 1 41 - -
Trre14g00638 683 ProSiteProfiles GRAS family profile. 297 682 IPR005202 -
Trre14g00638 683 MobiDBLite consensus disorder prediction 365 388 - -
Trre14g00638 683 Pfam GRAS domain family 306 682 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00638 Trre-Chr14 5270530 5273227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00638 300 683 GRAS Transcription Factor Family AT1G66350 44.872 3.70e-98 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre14g00638 GRAS 8.8e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00638 - - gmx:100805039 931.013