Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00630 ATGAGGGCAGCTGCATTGATGAGGAAACGTGAGTTGTGGCTGTATCGTGATAAGTGGATAGTTGGACCGATACCTGGAGTTTATGTTGGCGATGTTTTTCTTTTTAGGATGGAGTTGTGTGTAGTTGGTTTGCATATGCAAATACAGGCTGGGATTGATTATCTATCCAAGAGTATGTGTTCCAATGGCGAACCAATTGCTACGAGTGTTATTGTCTCGGGCGGTTATAAAGATGACATGGAGTTAGATGATGGAGATGTGATAATACTAACATGA 276 0.4167 MRAAALMRKRELWLYRDKWIVGPIPGVYVGDVFLFRMELCVVGLHMQIQAGIDYLSKSMCSNGEPIATSVIVSGGYKDDMELDDGDVIILT 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00630 91 ProSiteProfiles YDG domain profile. 22 91 IPR003105 -
Trre14g00630 91 Pfam SAD/SRA domain 21 90 IPR003105 -
Trre14g00630 91 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 91 - -
Trre14g00630 91 Gene3D - 3 91 IPR036987 -
Trre14g00630 91 SUPERFAMILY PUA domain-like 3 91 IPR015947 -
Trre14g00630 91 SMART G9a_1 17 91 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00630 Trre-Chr14 5208047 5208322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00630 21 81 Su(var)3-9 homologs AT1G73100 49.180 7.17e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00630 - K11420 tpra:123924427 160.999