Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00627 ATGGATAAAAATCTCGCTGAAAATTCCACCGACGGAGAACAACAACAACCACCGTCGGAAAATGAAACGGAGGAAGAGAAGAAAAATGAAACCGTAGATACCGCTGAATCTCCTCCTCATAGCCTTGACAAGATTTCAAACGAAATTGATCAATTTCTTGTTGCCAATGAGAATATTGAAGGAGTTTCGATTGAGATTCCTTGTTATGTAGAAACGTTTTTGGATCTTGTGACGGAGAATTTAGCGAAACGTGAAACAGAATGTAAATTGAAATGGGAAGAGATTCTTGTGAAAGATTCATGGTTGCTTGAATCTGTGAATCGGATTTCAAAGCTTAAGAAAATTCTGACGAATCACCATGATCATGAAAATGAAAGAAGAGATTCGATATCGAATCGTATTGGCGTGATTCAACAGAAAGCGATGTCGTTTTTGGAAGAAGATTTTCGGTTGTTGATAGAAGATTCTAGAATTCCAACTGATTTGAATCCTGATGGAAACAAGGAAGGGGAATCCAATGATCAGAATCAACAGGAAGAATCCGATAAGAATTTTCCGGGTTATACGGACGAGGCGATTGCTTGTATGGGCAAAATTTCCCGAGAGATGTTAAACGGCGGATATGAATCGGAGATTTGTCAGGTCTACATTGTAGCACGAAGGACGGCTTTCGATGAGATTCAACAACAGCTAGGGTTGGAAAGAATCAGCATTGATGATATGGTTCAGAAGGTTCAATGGGAGATTCTAGCAAGAGACATGATTCCGGCGTGGACAAACACGTTTCGTCAATGCGCAGGAGTGTATTTCCCTGGGGAGAAGAAATTAGCGGAGGCGGTGTTCTCAAGTCATCCGTCTGTTGCGGAGGGTTTGTTTAGTAGCCTCTCCCGCGGAGTTGTGATTCCTCTTCTCAACTTCGCGGAAGGGGCTGCTATGACTAAGCGTGCTGGAGAGAAGCTATTCAAATTGCTTGACATGTACGAAACTCTTAGAGATGTTATATCAAAATTGGTTGGACTCTTTCCGGAAGAGTCCTCAGAAGAGTTAAAGACAGAGATAAATCTCGCCAAGTCACGTCTTGGCGAGGCAGTTATCTCTATCTTTTGTGACTTGGAAAATCAAATCAAATCAGAACCTGCAAAGAATCCCGTCCCCGGTGGCGCGGTTCACCCTCTCACACGCTACATAATGAACTACCTCAACATAGCTGGTGATTACAAAGAAACACTTGAACAAGTTTTCAAGAATCATTCAAAGATCGAACGCGCAGATTCAACGGGTACATCTGATCATGATCACAACGAAAACATTATTAAGGAAGCGTCGTCGCCATTTGCAGCACAAGTAATGAGAGTCATGGAATTACTCGATACAAGCCTCGATGGGAAAGCAAAATTGTACCGCGACGTGGCATTAAGCAACTTCTTCATGATGAACAATGGTAGATACATTTTACAAAAAATCAAAGGATCAACTGAATTGAGCCAATTGATGGGTGAAACATGGTGTAGAAGAAAATCTTCTGAATTAAGAAACTACCACAAAACCTACCAAAGAGAAACATGGAACAAAGTGCTAACATGTCTGAGTCATGAAGGGTTGAGTGTAAATGGAAAGGTGCAAAAACCAGTACTGAAAGAAAGGTTCAAGAGCTTCAATTCAATGTTTGATGAGATTCATAAGACACAAAGCTCATGGGTTGTGAAGGATGAACAACTTCAATCAGAGCTTCGAGTTTCCATATCGGCCGTGGTGATTCCGGCATACCGGGCATTCATTGGGAGGTTTTCGCAGAATTTAGATGGTGGAAGACAGACAGAGAAATATATTAAGTATCAACCTGAGGATATAGAGACTTATATTGATGAGTTGTTTGATGGAAAACCTCATCAATCTATTGGTAGAAGGAAATCATAA 1917 0.4105 MDKNLAENSTDGEQQQPPSENETEEEKKNETVDTAESPPHSLDKISNEIDQFLVANENIEGVSIEIPCYVETFLDLVTENLAKRETECKLKWEEILVKDSWLLESVNRISKLKKILTNHHDHENERRDSISNRIGVIQQKAMSFLEEDFRLLIEDSRIPTDLNPDGNKEGESNDQNQQEESDKNFPGYTDEAIACMGKISREMLNGGYESEICQVYIVARRTAFDEIQQQLGLERISIDDMVQKVQWEILARDMIPAWTNTFRQCAGVYFPGEKKLAEAVFSSHPSVAEGLFSSLSRGVVIPLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVISKLVGLFPEESSEELKTEINLAKSRLGEAVISIFCDLENQIKSEPAKNPVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFKNHSKIERADSTGTSDHDHNENIIKEASSPFAAQVMRVMELLDTSLDGKAKLYRDVALSNFFMMNNGRYILQKIKGSTELSQLMGETWCRRKSSELRNYHKTYQRETWNKVLTCLSHEGLSVNGKVQKPVLKERFKSFNSMFDEIHKTQSSWVVKDEQLQSELRVSISAVVIPAYRAFIGRFSQNLDGGRQTEKYIKYQPEDIETYIDELFDGKPHQSIGRRKS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00627 638 MobiDBLite consensus disorder prediction 158 188 - -
Trre14g00627 638 SUPERFAMILY Cullin repeat-like 103 626 IPR016159 -
Trre14g00627 638 MobiDBLite consensus disorder prediction 158 178 - -
Trre14g00627 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 100 627 IPR004140 GO:0000145|GO:0006887
Trre14g00627 638 MobiDBLite consensus disorder prediction 1 43 - -
Trre14g00627 638 Pfam Exo70 exocyst complex subunit 258 623 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre14g00627 638 MobiDBLite consensus disorder prediction 20 34 - -
Trre14g00627 638 Gene3D Exocyst complex component Exo70 87 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00627 Trre-Chr14 5195356 5197272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00627 15 638 EXO70 exocyst subunit family AT5G13990 47.910 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00627 K07195 - gmx:100820172 863.218