Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00616 ATGACAAAAAAGTATGAGGGATGTGCTGTGGGTAACAGAACAACACCTTCTGTTGTTGCTTTCACTCCTGATCAAAGGTTGATCGGTGATGCTGCTAAGAATCAGGCTGCCTCCAACCCTGAAAACACTGTCTTTGATGCTAAGAGGTTGATTGGTGATGCTGCAAAGAATCAATCTGCCACCAACCCCGAAAACACCGTCTTTGATGCTAAGAGGTTAATTGGTAGAAAGTTTAGTGATTCTGTTGTTCAAAAAGACATAAGCCGACTTCGAATTGATGAAATGATGGAATCCATAAAAATTATTCAACAGGCTTTGGAGGGAATTTCAGGTGGGCCATATGAAAATTTAGAAATTCGCAGCTTTGATAGAGAACAGGAGCCAGAATGGAATGATTTTGAATATCGATTCATTGGTAAAAAATCGTCTCCGACTTTTGCTGAGAACTTCTTAATTAACAAATAA 465 0.3914 MTKKYEGCAVGNRTTPSVVAFTPDQRLIGDAAKNQAASNPENTVFDAKRLIGDAAKNQSATNPENTVFDAKRLIGRKFSDSVVQKDISRLRIDEMMESIKIIQQALEGISGGPYENLEIRSFDREQEPEWNDFEYRFIGKKSSPTFAENFLINK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00616 154 Pfam Hsp70 protein 10 53 IPR013126 GO:0005524|GO:0140662
Trre14g00616 154 Gene3D - 52 102 - -
Trre14g00616 154 SUPERFAMILY Actin-like ATPase domain 10 53 IPR043129 -
Trre14g00616 154 PRINTS 70kDa heat shock protein signature 32 40 - -
Trre14g00616 154 PRINTS 70kDa heat shock protein signature 10 22 - -
Trre14g00616 154 SUPERFAMILY Actin-like ATPase domain 49 100 IPR043129 -
Trre14g00616 154 FunFam heat shock 70 kDa protein-like 6 49 - -
Trre14g00616 154 Gene3D - 6 51 - -
Trre14g00616 154 PANTHER HEAT SHOCK PROTEIN 70KDA 49 103 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00616 Trre-Chr14 5105830 5113711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00616 11 87 Calmodulin-binding Proteins AT1G16030 57.143 5.62e-18 77.8