Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00614 ATGGATATGGAGAGCACGATAGAGACTGATAGTAGTGGTGGTGGTTATCATCCACAGCCACCACCGCATCAAGAACTTGTGACTCAGTATAAGGCTGTTCTGGCTGAGCTTACTTTCAACTCGAAACTTATAATTACCAATTTGGCTATAATTGTTGGAGAGAATCTTTCTGCTGCAAAATCAATTGCTGGAGTTGTTTGTGCTAACATTCCAGAGGTACCAAGTGACCAAAAGCTGCCATCTCTTTATCTCTTAGATAACTACCCGAGGTATACTGCAATACATACAGACAGGTTGATCTTCCTGTCCATTCAAGAACTCGGCTTCACTCCAGCAGTCAATGGTTCAGCTTCTGCATCTGCCGCCCTTAGAAGTGATTCTCATGCTCAACGCCCAGCTCATGGCATTCATGTGAATCTCAAATATTTAGAAAGGCAACGCCTTCAGCAGTCGAACATGGGACTATTTAATGATATGACTGGAGTTATTTCAAACTCAAATGAGGACCCAGAGAGGCCAAATAGAGCTTTGGGTGCTGCACGACCATGGCTGGATCCTAGGATTAACATGCATATAAATGCATTTAATGATTCTGTTCCTGACAAGAGCATTGGCGGTGCCTACGGAGACAATGAATATAGTTCTAGTCTTTCCATTAATTTGGTCTCAGGTGTTGGAAGAACTGGAAGTAGGCTCATTGGCGATGTTGCAGAGACCTTACCCGGGAAAAGAAGTGGTTTCAGCCTCAAACATGGTTTTTCAAATCATGAAGCACCGAAACCTATGAATTTGGATGCACATAACATCAGGAACAATGTGATATCAATGAACTGGAAAAATTCATAG 846 0.4255 MDMESTIETDSSGGGYHPQPPPHQELVTQYKAVLAELTFNSKLIITNLAIIVGENLSAAKSIAGVVCANIPEVPSDQKLPSLYLLDNYPRYTAIHTDRLIFLSIQELGFTPAVNGSASASAALRSDSHAQRPAHGIHVNLKYLERQRLQQSNMGLFNDMTGVISNSNEDPERPNRALGAARPWLDPRINMHINAFNDSVPDKSIGGAYGDNEYSSSLSINLVSGVGRTGSRLIGDVAETLPGKRSGFSLKHGFSNHEAPKPMNLDAHNIRNNVISMNWKNS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00614 281 SMART 558neu5 25 156 IPR006569 -
Trre14g00614 281 Gene3D - 19 90 IPR008942 -
Trre14g00614 281 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 3 86 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Trre14g00614 281 MobiDBLite consensus disorder prediction 1 22 - -
Trre14g00614 281 SUPERFAMILY ENTH/VHS domain 22 87 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00614 Trre-Chr14 5020309 5022860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00614 10 145 C2H2 Transcription Factor Family AT4G04885 36.686 2.07e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00614 K14400 - gmx:100788958 320.857