Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00569 ATGGAGTTGCAGAATGATCATCATTGGAATGTTAAAATGATGCACGTGAAGAAGGTGATGACTGATGAACAAATAGAAACACTTCAGAAACAAATCGCTGCTTATGGAACTATTTGTGAACAACTCGTTCAAATGCATAAAACTCACTCTTCTAACCAACTTCTTAATGGGGATAGGCTGGGAGGTATGTATTTTGACCCAATGATCACCAAAATAGGTTCGAGACAGCGTTGGTCACCAACCCCTTTGCAGCTTCAAACTCTGGAGCGAGCATTTGATACTGAAAAGGGGACTCCAAGCAAGGAAAAGATAAAGGAGATAACCGCTAATTTAACCAAGCACGGGCAGATTTCTGAGACCAATGTATATAATTGGTTTCAGAATAGGCGTGCTAGGTCAAGGAAAAAGCAGCAAAATTTGACGCCTACTAGTGTTAATACTGACACAGAAGTTGAGACAAATGTTGATTCTAATGATAAGAATAGCAAACCGGACGAGTTTGTTGCGTCTCAGCCTGCTGAAAATTTGTGTCACAAAAACTCTCAAGTGTCCTCTGGCTGGCAGTACTTAACTCCAGAATTAGATGACAGTTTGGAATCCTCTAAAAACTTTGATCATGTGGCTGCTATCGATGGTATGCTATCACACTCTAGGAGCAACGATTATCTTGTTGAAAATTTGGAAGCACCTGAGAACAAGAACATGGAAGGTTAA 714 0.4034 MELQNDHHWNVKMMHVKKVMTDEQIETLQKQIAAYGTICEQLVQMHKTHSSNQLLNGDRLGGMYFDPMITKIGSRQRWSPTPLQLQTLERAFDTEKGTPSKEKIKEITANLTKHGQISETNVYNWFQNRRARSRKKQQNLTPTSVNTDTEVETNVDSNDKNSKPDEFVASQPAENLCHKNSQVSSGWQYLTPELDDSLESSKNFDHVAAIDGMLSHSRSNDYLVENLEAPENKNMEG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00569 237 ProSiteProfiles 'Homeobox' domain profile. 71 136 IPR001356 GO:0003677
Trre14g00569 237 SUPERFAMILY Homeodomain-like 68 138 IPR009057 -
Trre14g00569 237 CDD homeodomain 75 137 IPR001356 GO:0003677
Trre14g00569 237 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 228 IPR044559 GO:0003700
Trre14g00569 237 MobiDBLite consensus disorder prediction 131 166 - -
Trre14g00569 237 Pfam Homeodomain 75 135 IPR001356 GO:0003677
Trre14g00569 237 Gene3D - 77 141 - -
Trre14g00569 237 SMART HOX_1 73 140 IPR001356 GO:0003677
Trre14g00569 237 MobiDBLite consensus disorder prediction 137 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00569 Trre-Chr14 4617852 4619561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00569 14 137 Wox Gene Family AT4G35550 66.406 3.16e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre14g00569 Homeodomain 4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00569 - - tpra:123891516 356.681