Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00566 ATGCCCCGGGAAGCTGGATGCTTAGCTGAAGAAAATATTGGCTATGAGAATTCTTCAAGAATTGAACAAAAGCGAAGTCATCAATGGCTTATGGATACAGGTGAACCAGGAATGTTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGACAGACCAATTTCAGCAGTGAATGTTTCACAATGGGACACGGGTTTGGGATTTCACCCACTGACAGGACAATTTTCTGACCGTCTCTTTGGATCTGATCTTATACGGTCTGTTAATTCAGTCGATAAAAATACACCGTCAGTTGGAAGTGGAAATCCGAACATGGGAATAAAGGATTTTGGTAATCAGTATGGTATTGATCCATCTGTCAGACTGTCAATATCTTCTTCATGTCTGAATTTTGGCGGTATCAGGAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACCATGGAATGCCAGCTGCATCAATAGGGCACTCCTATAGTATGTCTGATAAAAATGCATTTTCAATTGGTTCTGATTACAATAAGAATGGCGGAAATATTACATCGGGCTCAACTTATAACAATGGAAGTGACAACACCGTTGCTAATGAAAATCTCTTTTCAACGGGTCACATCTTCAATAAAGGGGATAGGAGTTTTTTGTTGATGGGTCACAATTATGGCAGGGGAGATGAAAGTGAAAGTGTCTTATCTATTAATCGGTCATTTGATAGGGGAGATGGAAATTTTGTAACAATGGGTCAGACATATGGAAAGGACGATGGCAATTTGATATCTCTGGGAACTTCATATTCCAAGGGGAATGAGAGCTTTACATCAATGGGTCCAACCTATGGTAAATCAGGACAAACTTTCACAACTGTTCCATCGTCCGATGCCGGAAACTCTAGCTCTTTTGGAGGTTTTCATGTTGATCCTGAACAGATTCCCTCTGGAGGAATCATTAATAGTTCCAATCCATTAATAAGCAATCAGAACTCGGCTCAAGGTGTAGATAGCCAGAAGGATCTGACTGAATCAAACCCTGATCCGCTTGTAAATATCACTCAAAAACATAACGCTAAAAATGATACTGTTGTTAAGAACATAGAGCCAAATCCGACTAAGAAGACTTCTAACAAATTTCCTACAAATGTCAAAAGTTTGTTGTCAACCGGTATTTTTGATGGCATTCCGATAAAATATTGTACATGGTCAAGGGAGAGATATCTTCAAGGAGTCATAAAAGGAACTGGTTACTTGTGTTCATGTGATGTCTGCAAGGGGCAAAAGGCTCTTAATGCATATGAATTTGAGCGTCATGCCGGGGGCAAGTCAAAACACCCTAACAATCACATTTTCTTTGAGAATGGAAAATCAATATATGGTGTTGTTCAAGAGCTGAAAAACAGTCCTCAGGAGATGCTTTTTGATGCCATTCAAACGGTGACTGGCACCACCATAAACCAAAGGAACTTCCGTATTTGGAAAGCATCATACCAAGCTGCTACTCGTGAGCTTCAGCGCATCTACGGAAAGGATGATGACGCAGCCATACCGTCTTAA 1542 0.4021 MPREAGCLAEENIGYENSSRIEQKRSHQWLMDTGEPGMFSNKKQAVEAVSDRPISAVNVSQWDTGLGFHPLTGQFSDRLFGSDLIRSVNSVDKNTPSVGSGNPNMGIKDFGNQYGIDPSVRLSISSSCLNFGGIRKVKVNQVRDSDHGMPAASIGHSYSMSDKNAFSIGSDYNKNGGNITSGSTYNNGSDNTVANENLFSTGHIFNKGDRSFLLMGHNYGRGDESESVLSINRSFDRGDGNFVTMGQTYGKDDGNLISLGTSYSKGNESFTSMGPTYGKSGQTFTTVPSSDAGNSSSFGGFHVDPEQIPSGGIINSSNPLISNQNSAQGVDSQKDLTESNPDPLVNITQKHNAKNDTVVKNIEPNPTKKTSNKFPTNVKSLLSTGIFDGIPIKYCTWSRERYLQGVIKGTGYLCSCDVCKGQKALNAYEFERHAGGKSKHPNNHIFFENGKSIYGVVQELKNSPQEMLFDAIQTVTGTTINQRNFRIWKASYQAATRELQRIYGKDDDAAIPS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00566 513 Pfam Tify domain binding domain 405 460 IPR032308 -
Trre14g00566 513 PANTHER AUTOIMMUNE REGULATOR 6 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00566 Trre-Chr14 4609691 4611543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00566 368 493 PHD Transcription Factor Family AT3G53680 51.587 1.04e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00566 - - gmx:100782217 707.212