Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00565 ATGTCTTTTCAGAATAAAGGCTTTTGGATGCCCCGGGAAGCTGGATGCTTAGCTGAAGAAAATATTGGCTATGAGAATTCTTCAAGAATTGAACAAAAGCGAAGTCATCAATGGCTTATGGATACAGGTGAACCAGGAATGTTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGACAGACCAATTTCAGCAGTGAATGTTTCACAATGGGACACGGGTTTGGGATTTCACCCACTGACAGGACAATTTTCTGACCGTCTCTTTGGATCTGATCTTATACGGTCTGTTAATTCAGTCGATAAAAATACACCGTCAGTTGGAAGTGGAAATCCGAACATGGGAATAAAGGATTTTGGTAATCAGTATGGTATTGATCCATCTGTCAGACTGTCAATATCTTCTTCATGTCTGAATTTTGGCGGTATCAGGAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACCATGGAATGCCAGCTGCATCAATAGGGCACTCCTATAGTATGTCTGATAAAAATGCATTTTCAATTGGTTCTGATTACAATAAGAATGGCGGAAATATTACATCGGGCTCAACTTATAACAATGGAAGTGACAACACCGTTGCTAATGAAAATCTCTTTTCAACGGGTCACATCTTCAATAAAGGGGATAGGAGTTTTTTGTTGATGGGTCACAATTATGGCAGGGGAGATGAAAGTGAAAGTGTCTTATCTATTAATCGGTCATTTGATAGGGGAGATGGAAATTTTGTAACAATGGGTCAGACATATGGAAAGGACGATGGCAATTTGATATCTCTGGGAACTTCATATTCCAAGGGGAATGAGAGCTTTACATCAATGGGTCCAACCTATGGTAAATCAGGACAAACTTTCACAACTGTTCCATCGTCCGATGCCGGAAACTCTAGCTCTTTTGGAGGTTTTCATGTTGATCCTGAACAGATTCCCTCTGGAGGAATCATTAATAGTTCCAATCCATTAATAAGCAATCAGAACTCGGCTCAAGGTGTAGATAGCCAGAAGGATCTGACTGAATCAAACCCTGATCCGCTTGTAAATATCACTCAAAAACATAACGCTAAAAATGATACTGTTGTTAAGAACATAGAGCCAAATCCGACTAAGAAGACTTCTAACAAATTTCCTACAAATGTCAAAAGTTTGTTGTCAACCGGTATTTTTGATGGCATTCCGATAAAATATTGTACATGGTCAAGGGAGAGATATCTTCAAGGAGTCATAAAAGGAACTGGTTACTTGTGTTCATGTGATGTCTGCAAGGGGCAAAAGGCTCTTAATGCATATGAATTTGAGCGTCATGCCGGGGGCAAGTCAAAACACCCTAACAATCACATTTTCTTTGAGAATGGAAAATCAATATATGGTGTTGTTCAAGAGCTGAAAAACAGTCCTCAGGAGATGCTTTTTGATGCCATTCAAACGGTGACTGGCACCACCATAAACCAAAGGAACTTCCGTATTTGGAAAGCATCATACCAAGCTGCTACTCGTGAGCTTCAGCGCATCTACGGAAAGGATGATGACGCAGCCATACCGTCTTAA 1569 0.4009 MSFQNKGFWMPREAGCLAEENIGYENSSRIEQKRSHQWLMDTGEPGMFSNKKQAVEAVSDRPISAVNVSQWDTGLGFHPLTGQFSDRLFGSDLIRSVNSVDKNTPSVGSGNPNMGIKDFGNQYGIDPSVRLSISSSCLNFGGIRKVKVNQVRDSDHGMPAASIGHSYSMSDKNAFSIGSDYNKNGGNITSGSTYNNGSDNTVANENLFSTGHIFNKGDRSFLLMGHNYGRGDESESVLSINRSFDRGDGNFVTMGQTYGKDDGNLISLGTSYSKGNESFTSMGPTYGKSGQTFTTVPSSDAGNSSSFGGFHVDPEQIPSGGIINSSNPLISNQNSAQGVDSQKDLTESNPDPLVNITQKHNAKNDTVVKNIEPNPTKKTSNKFPTNVKSLLSTGIFDGIPIKYCTWSRERYLQGVIKGTGYLCSCDVCKGQKALNAYEFERHAGGKSKHPNNHIFFENGKSIYGVVQELKNSPQEMLFDAIQTVTGTTINQRNFRIWKASYQAATRELQRIYGKDDDAAIPS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00565 522 PANTHER AUTOIMMUNE REGULATOR 8 500 - -
Trre14g00565 522 Pfam Tify domain binding domain 414 469 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00565 Trre-Chr14 4609691 4612457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00565 377 502 PHD Transcription Factor Family AT3G53680 51.587 1.07e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00565 - - gmx:100782217 722.62