Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00553 ATGGACTCAACTATTCCTCTTTCAAGTTGCGGAGCAGTCCTAAAAGGACTCTGCACAGTGAACAATCTCAACACTGAGATCCTGTTAGCCGATGCCTTGGATTTGCTATTTCATGCTAGAGAAGGTCAAACTAAAAGGAAAAGATACAATGCCATGGACACTTCTGAAACCCTCAATAGGGTTGATCAACTTGAAGGCACAGGAGATGCAAAGCGTTTTATTAGAAGGAGAATTTCTGATGCCTCTGTTCAGAGTGATATGAAGTTGTGGCCATTTAAGGTCATTTCTGGTCCTGGTGAGAAGCCTATGATTGGTGTTAAATACAAGGGTGAGGAAAAGCAGTTTGCTGATGAGGAAATCTCGAAGGAAGAAATCGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCTGAAGATGAAGAGCACAAGAAGAAGGTTGATGCAAAAAATGCTTTGGAAAACTATGCTTACAACATGAGGAACACAATTAAAGACGAGAAGATTGGATTAAAGTTGAAGGAACTTGAGAACCTTTGCAACCCAATCAGTGCTAAGATGTACCAAGGTGGTGGTGCTCAAGATATGGCTGGTGGTATGGATGATGAAGTTCCTCCAGCTGCAGGTGGTGCTGGTCCCAAGATCGAAGAAGTTGATTAA 657 0.4231 MDSTIPLSSCGAVLKGLCTVNNLNTEILLADALDLLFHAREGQTKRKRYNAMDTSETLNRVDQLEGTGDAKRFIRRRISDASVQSDMKLWPFKVISGPGEKPMIGVKYKGEEKQFADEEISKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGLKLKELENLCNPISAKMYQGGGAQDMAGGMDDEVPPAAGGAGPKIEEVD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00553 218 Gene3D - 122 172 IPR029048 -
Trre14g00553 218 Gene3D - 173 218 IPR029048 -
Trre14g00553 218 MobiDBLite consensus disorder prediction 189 218 - -
Trre14g00553 218 Coils Coil 118 145 - -
Trre14g00553 218 FunFam heat shock 70 kDa protein-like 69 123 - -
Trre14g00553 218 Pfam Hsp70 protein 117 171 IPR013126 GO:0005524|GO:0140662
Trre14g00553 218 SUPERFAMILY Actin-like ATPase domain 69 136 IPR043129 -
Trre14g00553 218 PANTHER HEAT SHOCK PROTEIN 70KDA 67 122 IPR013126 GO:0005524|GO:0140662
Trre14g00553 218 Gene3D - 69 121 - -
Trre14g00553 218 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 147 194 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00553 Trre-Chr14 4516731 4517918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00553 120 218 Calmodulin-binding Proteins AT3G09440 60.448 1.07e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00553 K03283 - gmx:100787543 137.887