Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00550 ATGGCACCAAAGCGCGGTGGAAAAGCACCAGTTGCAGCTGCGAAGAAGAAGCAACCAGAGAAAGTGGTGAATCCACTTTTTGAGAAAAGACCTAAGCAATTTGGGATCGGTGGTGCTTTGCCTCCAAAGAGAGATTTAACTAGGTTTGTGAAATGGCCTAAGAATGTTCAAATCCAGAGGAAGAAGAGGATCCTTAAGCAGAGGTTGAAGGTTCCACCAGCACTTAACCAGTTCACTAAGACACTTGATAAGAACCTTGGTAATTGTAATCTATCCATTAATCATTTTTTGTTCTACTAA 300 0.4167 MAPKRGGKAPVAAAKKKQPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKNVQIQRKKRILKQRLKVPPALNQFTKTLDKNLGNCNLSINHFLFY 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00550 99 PRINTS Ribosomal protein L7A family signature 68 87 IPR001921 -
Trre14g00550 99 PRINTS Ribosomal protein L7A family signature 31 48 IPR001921 -
Trre14g00550 99 PRINTS Ribosomal protein L7A family signature 48 65 IPR001921 -
Trre14g00550 99 Gene3D - 52 96 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00550 Trre-Chr14 4492465 4492847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00550 1 93 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 72.043 1.10e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00550 K02936 - gmx:100797399 140.584