Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00520 ATGAAGAAAGCTTTTCATCACTTCAACTTGACACTTTTCACAACTTTCCTGATCTCACTTACAAATTTCCTAACATGTTTTGCAAACAACGACGTAACGGTTCAGTTAAACGACGATGTCCTCGGTTTAATGGTGTTCAAATCAGACCTATATGACCCTTCATCATATCTCTCTTCATGGAATGAAGATGATATCAATCCATGTTCATGGCAATATGTTAAATGCAATCCACAAACTCAAACAGTTTCTGAACTTTCTTTAGATGGTTTAGGTTTATCAGGTAAAATAGGAAGAGGTCTTGAAAAATTACAACATTTAGTAACACTTTCACTTTCTCATAACAATTTCAGTGGCACTATTAGTCCTTCACTAACACTTTCAAACTCTCTTCAAAAACTTAACCTTAGTCATAACTCATTTTCTGGTCAATTACCTAACACTTTCATCAACATGAGTTCAATGAGATTCATTGATCTATCTCATAACTCATTCGCGGGACAATTGTTCGAAACTTTTTTCGATAACTGTTTCTTCCTTCGTAGCGTTTCGTTTGCTATGAATTCATTTGAAGGACAAATTCCTATGTCATTATCTAAATGTTCTTTGTTGAATAGTGTTAATCTTTCAAATAATCATTTTAGTGGAAATGTTGATTTTTCTAGTGTTTGGTCATTGAATAGGCTTAGAAACTTAGATCTATCAAACAATGCTTTATCTGGAAACTTGGTTAATGGAATTTCAACTTTGCATAATTTGAAAGAGTTAATGTTACAAAATAATCAGTTTTCAGGTTCATTACCAAATGATATTGGATTTTGTCTTCATTTGATTAAGGTTGATTTTAGTACTAATCAGTTTAGTAGTGAATTACCTGAGTCATTAGGTAGATTAAACTCTTTGAGCTATTTAAGAGTTTCAAATAATCTCTTATCTGGTGAATTTCCTCAATGGATTGGTAACTTAACAAGTTTGGAACATTTGGACTTATCTAATAATCAATTCTATGGAAACATTCCTTTGTCATTGGTTTCATGCACAATGTTATCTAAGATTTTTCTTAGAGGGAATAGTTTCAATGGTACTATACCTGAGGGATTGTTTGGATTAGGATTAGAGGAAATGGATTTTTCTCATAATCAATTAATAGGTTCAATTCCAGCAGGGTCTAATAGGCTATTAGAAACTCTTACAAAGTTGGATCTTTCAGTTAATCATCTTCAAGGGAATATTCCTGCAGAAATTGGTCTACTTTCAAAGTTGAGATACTTGAATTTGTCTTGGAATGATCTTCATTCTCAGATTCCACCTGAATTTGGTTTGCTTCAGAATCTAATGGTTTTGGATCTTCGTAATAGCGCAATGTTTGGTTCGATTCCGGAAGATACATGTGATTCAGGAAATTTGGCTGTTCTGCAACTTGATGGAAATTATTTGAAAGGATCTATTCCAGAAGAGATTGGGAATTGTTCATCTCTTTACTTGTTGAGTTTGTCAAACAATAATTTGACAGGTCCAATCCCAAAATCAATGTCAAAGCTAAATAAGCTCAAAATCCTCAAGTTAGAATTCAATGAACTTAGTGGAGAACTACCAATGGAGTTAGGAAAGCTTCAAAATCTTCTTGCTGTGAACATATCACATAACAGCCTCACAGGAAGGCTTCCAATGGGTAGCATTTTTCAAAACTTAGACAAAAGTTCATTGGAAGGAAACTATGGTCTTTGCTCACCCTTGCTTCAAGGTCCATGCAAAATGAATGTTCCTAAACCTATAGTTCTTGATCCACATGGCTTTGACAACCAAATGAATCCTCAAAGACCGAGAAATGAATCATCCGAGTCTAGTAGTCCAATTCATCATCACAGGTTCCTTAGTATTTCGGCTATTATAGCAATTGCAGCTTCTTTTCTTATTGTATTAGGAGTTATTGCTATTAGTCTAGTTAATGCTTCTGTAAGGAGAAAGCTAGCATTTGTTGAAAGTGCTTTGGAAAGTATGTGTTCAAGCTCTTCGAGATCAGGTGCACCAGCCACAGGTAAACTCATTCTGTTTGATTCGCAATCTTCACAAGATTGGATTAGTAATCCGGAAAACTTGCTCAACAAGGCATCTGAAATCGGTGAAGGAGTTTTCGGAACTGTTTACAAAGTTCCATTAGGATCACAACAAGGAAGAAATGTTGCAGTCAAGAAGCTTATCACATCGAACATACTCCAATTTCCGGAAGACTTCGATAGGGAAGTTAGAATTCTAGGTAAAGCCAGACACCCGAATTTGATAGCATTGAAAGGTTACTATTGGACTCCTCAGCTTCAGCTTTTAGTATCTGAATTTGCACCAAATGGTAACTTGCAATCCAAGTTACATGAAAAGCTTCCTTCGAGTCCTTCACTTTCTTGGCCTAATAGATTCAAGATTTTACTTGGAACAGCAAAGGGACTTGCACATTTGCATCATTCCTTCCGACCACCAATCATTCACTACAACATAAAACCTAGCAACATCTTACTCGATGAAAACTTCAACCCTAAGATATCAGATTTCGGGTTAGCTAGGCTTTTAACAAAGCTAGACAAGCATGTCATGAGTAACAGGTTTCAAAGTGCATTAGGTTATGTAGCACCTGAATTAGCATGTCAAAGCTTAAGGGTCAATGAGAAATGTGATGTCTATGGTTTCGGTGTGATGATACTCGAGTTAGTGACAGGTAGAAGGCCAGTGGAGTATGGTGAAGATAATGTGTTGATATTGAATGATCATGTGAGGGTTTTACTTGAACATGGTAATGTTTTGGAGTGTGTTGATCCAAGTTTGATGAATGAATTTCCTGAGGATGAGGTTTTACCTGTCTTGAAGCTTGCAATGGTGTGTACTTCTCAAATACCATCTAGTAGACCTACAATGGCTGAAGTTGTGCAAATATTGCAAGTCATTAAAACTCCTGTTCCTCAAAGGATGGAAGTGTTTTGA 2970 0.3576 MKKAFHHFNLTLFTTFLISLTNFLTCFANNDVTVQLNDDVLGLMVFKSDLYDPSSYLSSWNEDDINPCSWQYVKCNPQTQTVSELSLDGLGLSGKIGRGLEKLQHLVTLSLSHNNFSGTISPSLTLSNSLQKLNLSHNSFSGQLPNTFINMSSMRFIDLSHNSFAGQLFETFFDNCFFLRSVSFAMNSFEGQIPMSLSKCSLLNSVNLSNNHFSGNVDFSSVWSLNRLRNLDLSNNALSGNLVNGISTLHNLKELMLQNNQFSGSLPNDIGFCLHLIKVDFSTNQFSSELPESLGRLNSLSYLRVSNNLLSGEFPQWIGNLTSLEHLDLSNNQFYGNIPLSLVSCTMLSKIFLRGNSFNGTIPEGLFGLGLEEMDFSHNQLIGSIPAGSNRLLETLTKLDLSVNHLQGNIPAEIGLLSKLRYLNLSWNDLHSQIPPEFGLLQNLMVLDLRNSAMFGSIPEDTCDSGNLAVLQLDGNYLKGSIPEEIGNCSSLYLLSLSNNNLTGPIPKSMSKLNKLKILKLEFNELSGELPMELGKLQNLLAVNISHNSLTGRLPMGSIFQNLDKSSLEGNYGLCSPLLQGPCKMNVPKPIVLDPHGFDNQMNPQRPRNESSESSSPIHHHRFLSISAIIAIAASFLIVLGVIAISLVNASVRRKLAFVESALESMCSSSSRSGAPATGKLILFDSQSSQDWISNPENLLNKASEIGEGVFGTVYKVPLGSQQGRNVAVKKLITSNILQFPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVSEFAPNGNLQSKLHEKLPSSPSLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENFNPKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDPSLMNEFPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00520 989 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Trre14g00520 989 Pfam Leucine Rich Repeat 323 344 IPR001611 GO:0005515
Trre14g00520 989 Pfam Leucine Rich Repeat 419 438 IPR001611 GO:0005515
Trre14g00520 989 FunFam Inactive leucine-rich repeat receptor-like protein kinase 307 586 - -
Trre14g00520 989 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 195 291 - -
Trre14g00520 989 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 779 984 - -
Trre14g00520 989 Pfam Protein kinase domain 702 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00520 989 SMART LRR_typ_2 103 128 IPR003591 -
Trre14g00520 989 SMART LRR_typ_2 321 345 IPR003591 -
Trre14g00520 989 SMART LRR_typ_2 249 273 IPR003591 -
Trre14g00520 989 SMART LRR_typ_2 441 465 IPR003591 -
Trre14g00520 989 SMART LRR_typ_2 417 440 IPR003591 -
Trre14g00520 989 SUPERFAMILY L domain-like 52 395 - -
Trre14g00520 989 FunFam Leucine-rich repeat receptor-like protein kinase 36 194 - -
Trre14g00520 989 Gene3D Ribonuclease Inhibitor 37 196 IPR032675 -
Trre14g00520 989 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Trre14g00520 989 Pfam Leucine rich repeat 467 526 IPR001611 GO:0005515
Trre14g00520 989 SUPERFAMILY L domain-like 306 568 - -
Trre14g00520 989 ProSitePatterns Protein kinases ATP-binding region signature. 706 731 IPR017441 GO:0005524
Trre14g00520 989 Gene3D Ribonuclease Inhibitor 343 589 IPR032675 -
Trre14g00520 989 CDD STKc_IRAK 706 976 - -
Trre14g00520 989 ProSiteProfiles Protein kinase domain profile. 700 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00520 989 PRINTS Leucine-rich repeat signature 228 241 - -
Trre14g00520 989 PRINTS Leucine-rich repeat signature 321 334 - -
Trre14g00520 989 SUPERFAMILY Protein kinase-like (PK-like) 695 979 IPR011009 -
Trre14g00520 989 ProSiteProfiles Leucine-rich repeat profile. 419 441 IPR001611 GO:0005515
Trre14g00520 989 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 694 778 - -
Trre14g00520 989 Gene3D Ribonuclease Inhibitor 201 272 IPR032675 -
Trre14g00520 989 Gene3D Ribonuclease Inhibitor 273 342 IPR032675 -
Trre14g00520 989 MobiDBLite consensus disorder prediction 594 616 - -
Trre14g00520 989 Gene3D Transferase(Phosphotransferase) domain 1 780 986 - -
Trre14g00520 989 Gene3D Phosphorylase Kinase; domain 1 683 779 - -
Trre14g00520 989 PANTHER OS05G0588300 PROTEIN 246 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00520 Trre-Chr14 4218234 4221738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00520 13 986 Receptor kinase-like Gene Family AT3G28040 62.363 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Trre14g00520 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00520 - - gmx:100795810 1486.09