Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00504 ATGACTCAGGCTGTGGAAGTGTTGAATCGATATGGAACGGATCTGGTTGGAGAAGGGAGGGGTTCGGATTCGGAGTGTTTAGCTGGTTTTGAATGTTTTCTGAATATTGTGAGAGCATTAGGAATGGGATCTTGTATATCAGAGGGTTCTGGTTCGCCGCCTCTGCTAACTTATTCGCAGGAATTGAATGTCGATGGTGGGAAGAGGAGAAGGTTAAGGGGTTCCTCTACAATGGATTATAAGGTGCCTGGGAGAATGTTCTTAAATGGGTCAAGTGAGATTGCTTCTATGTATTGTAAGCAAGGTAAAAAAGGAATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTGGTTCAAAGGAGGATACCGTCTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAAAAAGTTAGGGATTCTTTCCCTTTAAAGCTTAGTGCACAATGGGATTTGCATTGTAAGAATAAAGATGGATTCAATGATCAAAATGGTGCTGCCACAAGTTATAATTCTGAAGAGAAAATTAGACTGGTTGAGTTCGATGAAACATATACTATCTCAGCACTAAGAGAATCCTATTTGAAGGCTAGCAAGATTATGGACAAAGAACTGAAACTGCATCGTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCAGGGGCCGGATCTTGTTGTCGGAAATGTGGGGGATTCAAGAGCTGTATTGGGAACCCGAGATCATGACAATTATCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATTAAGCTTCGTAAAGGAAGGGTTTTTTCCCTGAAGAATGAACCAGATGTGGCTAGAGTTTGGCTGCCTAACTCTGATTTCCCAGGTCTGGCTATGGCACGGGCTTTTGGAGATTTTTGCCTGAAGGACGTTGGATTGATTTCTGTTCCAGATGTTTCATATCGCCGCCTTACAGAGAAGGATGAATTTGTTGTGTTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGAGATTGTAGCAGCTGCACCACGGTCAACTGCTGCTCGAGTACTGGTTGAGTCAGCTGTTCGTTCTTGGAGGGCAAAATTCCCTTTCTGTAAGGTTGATGATTGTGCTGCAGTGTGCCTCTTCCTTAATTCAAATACAGAGTTGCAGGAAGAACATACCACAGACGAGTTGACACCAGATGCATCAAAGAATCCAGTTGATCAATCATCTCTACCTAGTGAGAATGGAATTGGAGTGGAAGCCGAAAAACAGCCGTAA 1326 0.4268 MTQAVEVLNRYGTDLVGEGRGSDSECLAGFECFLNIVRALGMGSCISEGSGSPPLLTYSQELNVDGGKRRRLRGSSTMDYKVPGRMFLNGSSEIASMYCKQGKKGINQDAMLVWENFGSKEDTVFCGVFDGHGPYGHRVAKKVRDSFPLKLSAQWDLHCKNKDGFNDQNGAATSYNSEEKIRLVEFDETYTISALRESYLKASKIMDKELKLHRDIDCFCSGTTAVTLIKQGPDLVVGNVGDSRAVLGTRDHDNYLIAVQLTIDLKPNLPKEEERIKLRKGRVFSLKNEPDVARVWLPNSDFPGLAMARAFGDFCLKDVGLISVPDVSYRRLTEKDEFVVLATDGIWDVLSNEEVVEIVAAAPRSTAARVLVESAVRSWRAKFPFCKVDDCAAVCLFLNSNTELQEEHTTDELTPDASKNPVDQSSLPSENGIGVEAEKQP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00504 441 MobiDBLite consensus disorder prediction 415 431 - -
Trre14g00504 441 ProSiteProfiles PPM-type phosphatase domain profile. 94 398 IPR001932 -
Trre14g00504 441 Pfam Protein phosphatase 2C 108 376 IPR001932 -
Trre14g00504 441 Gene3D - 90 407 IPR036457 -
Trre14g00504 441 SMART PP2C_4 88 396 IPR001932 -
Trre14g00504 441 CDD PP2Cc 94 398 IPR001932 -
Trre14g00504 441 PANTHER PROTEIN PHOSPHATASE 92 396 IPR015655 GO:0004722|GO:0006470
Trre14g00504 441 SUPERFAMILY PP2C-like 92 400 IPR036457 -
Trre14g00504 441 MobiDBLite consensus disorder prediction 406 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00504 Trre-Chr14 4111215 4115451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00504 42 401 PP2C-type Phosphatase Gene Family AT3G02750 55.760 2.10e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00504 - - gmx:100802479 705.671