Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00496 ATGGCTTCATCTTCCACAAGATTGGCAACGACTGCAATTCAAAGGCAAAAAACCAGAGGTTTTAAAACAATAATAGATCCACACCAGGTCGAATTTCAAATTTGTCCCAAATTCAAAACTGATTGGGGTCACAAGATAAAAGAAGACCCAATTGCTTTTTTAGTTCACCCGTCTGGGAACACAGCGTGGATGGAATTTCACATAGACGGAGATAACTGCTACATGACGGACGGCAAAATAGCTTCACTTCTTTTTGGAATCAAACAACCAACCCAAGTAGTACTTACATATAATCAACAAAACAAAACAATTAGAATGAGAAATAGTTCAAATGAGCCTGAAAACATAATATTGCCATTCCAAGACAACACATACACCTTGCATCCATATGAAAATGATCAGCTGTTTGGATGGGAATACAAAGTAAGTCAGGCTATGGCAAGTGAGACAAAGAACCAGGTTTTGCGCATACCGCCAAATACTGGTAAAAGTATACTCAGAGGAAGGAACTCCATTACAATCAAAACACAAGCCAACTTGGATGGATGCAGGTGGACCATCCATACTTATACAAGAGATAATGGAAGGAAGGAAAGATCATTTACCGAAGGATGGTATGCATTTAAGAGAGCAAACAACCTTGCCGAAGGAGATACATTGCAATTCCAAGTTTCTGATCCAGCCAATGTTATGACTGTCGAAATTGTCCGCGCCAACAATTAA 723 0.3928 MASSSTRLATTAIQRQKTRGFKTIIDPHQVEFQICPKFKTDWGHKIKEDPIAFLVHPSGNTAWMEFHIDGDNCYMTDGKIASLLFGIKQPTQVVLTYNQQNKTIRMRNSSNEPENIILPFQDNTYTLHPYENDQLFGWEYKVSQAMASETKNQVLRIPPNTGKSILRGRNSITIKTQANLDGCRWTIHTYTRDNGRKERSFTEGWYAFKRANNLAEGDTLQFQVSDPANVMTVEIVRANN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00496 240 SUPERFAMILY DNA-binding pseudobarrel domain 151 228 IPR015300 -
Trre14g00496 240 Gene3D - 88 240 IPR015300 -
Trre14g00496 240 Pfam B3 DNA binding domain 147 238 IPR003340 GO:0003677
Trre14g00496 240 CDD B3_DNA 155 237 IPR003340 GO:0003677
Trre14g00496 240 ProSiteProfiles B3 DNA-binding domain profile. 140 239 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00496 Trre-Chr14 4041173 4042700 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre14g00496 B3 2.6e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00496 - K18409 tpra:123909626 149.828