Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00495 ATGTACAATGGACAATCAAGCAATCAAATTTCTGCAGCAACTACCTTCAATCCTGTCATCCATAACATCGATTCTCTTGATTTTAATTTCCATGGAGGATACCAATGGGAAAAGATTGTAACATCAGCTCAAGCAAGTCAAAGAAAAAATCAAACTTTGTACATTCCAAGACAAACTGTGAGAGCAGCCATTGGATATAAAGAAACAATCATTTTGCAATCTGAAGAGTCGTTGAGATTAACTAAATGCAAAATTGTTACCGCTACAAGATACAACCATGATGAAGAAAAACATTTAACAACTGGTTGGTACACATTCATTCATGAAAACAACATCAATCCTGGAGACAAGTTGGTGTTCACATTTAATCAGTCACAAACCATCATGCGAGTAAAAATTGTCCGACCTCCAAATAAATGA 420 0.3524 MYNGQSSNQISAATTFNPVIHNIDSLDFNFHGGYQWEKIVTSAQASQRKNQTLYIPRQTVRAAIGYKETIILQSEESLRLTKCKIVTATRYNHDEEKHLTTGWYTFIHENNINPGDKLVFTFNQSQTIMRVKIVRPPNK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00495 139 ProSiteProfiles B3 DNA-binding domain profile. 38 137 IPR003340 GO:0003677
Trre14g00495 139 Pfam B3 DNA binding domain 43 135 IPR003340 GO:0003677
Trre14g00495 139 SUPERFAMILY DNA-binding pseudobarrel domain 41 135 IPR015300 -
Trre14g00495 139 Gene3D - 32 136 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00495 Trre-Chr14 4039630 4040182 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre14g00495 B3 1e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00495 - K01585 tpra:123886964 121.324