Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00491 ATGTCTTCTCAACTTTGTTGTTGTACCATTGCAATGTGTGTTACAATTCTACTTCAACTATGTTCCTTAGGAGTTTCACTTTCACACCCTAACAAGATCATACATTTACCAGGTCAACCACATGTTGAGTTTCATCAGTTTTCAGGTTATGTAAATGTTGATAACAAAAGCAAAAAAGCACTTTTTTTCTACTTTGTTGAAGCTCAACAAGATGCAGCTTCAAAACCACTTGTTCTTTGGCTTAATGGAGGGCCTGGCTGTTCTTCTCTTGGTGTTGGTGCATTTTCAGAAAATGGTCCTTTTAGGCCTAAAGGAGATGCCTTGGTTAGGAACCAATTCAGCTGGAATACAGAAGCAAATATGTTGTACTTGGAATCACCAATTGGAGTAGGCTTTTCATATTCAACTGATACTTCATCTTATGAAGGTGTAAATGACAAGATTACAGCCAGGGATAATCTAATCTTCTTGCAAAACTGGTTTGTAAAGTTTCCTAAATACAGAAACAGAAGTTTGTTCATTGTAGGAGAGAGTTATGCCGGTCATTATGTTCCTCAATTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTGTTTAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGTGACAGATTTTAATTCAAGAGCCGAGTTCTTTTGGTCGCACGGATTGATCTCAGACTTAACATACAAAATGTTCACTTCTGTCTGTAACTATTCAAGATATGTAAGAGAATACTATAACGGCGCTGTTTCTCCGATTTGTTCAAGTGTAATGAGCCAAGTTAGTACAGAAACAAGTAGATTTGTTGACAAGTATGATGTGACACTTGATGTATGTATATCTTCGGTTTTTTCACAAACCAAAGTCCTTAATCCTCAGCAAGTGACTGAAACGATTGATGTTTGCGTCGAAGACGAAACAGTCAATTATCTTAACAGGAAAGATGTTCAATCAGCTTTACAGGCACGTCTCGTTGGCATAAAAAGATGGTCTCCTTGCAGCAATGTTTTGGATTATGACTTGCGGGACTTAGAGATACCGACAATCACGGTTGTAGGCAAGCTAGTCAAGGCAGGAATTCCAGTATTGGTCTACAGTGGTGATCAAGATTCAGTTATCCCATTGACTGGAAGTAGAACTTTAGTACATCAATTGGCAAAAGAATTGAGAATCAATACAAGTGTGCCATACAGGGTGTGGTTTGAAGGGCAGCAGGTGGGTGGTTGGACTCAAGTTTATGGTAACATACTATCATTTGCTACAGTGAGAGGAGCATCACATGAAGCACCATTTTCACAACCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGAAGACCTCTACCAGAAGAATTTTGA 1389 0.3859 MSSQLCCCTIAMCVTILLQLCSLGVSLSHPNKIIHLPGQPHVEFHQFSGYVNVDNKSKKALFFYFVEAQQDAASKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGDALVRNQFSWNTEANMLYLESPIGVGFSYSTDTSSYEGVNDKITARDNLIFLQNWFVKFPKYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFVTDFNSRAEFFWSHGLISDLTYKMFTSVCNYSRYVREYYNGAVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALQARLVGIKRWSPCSNVLDYDLRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKELRINTSVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEGRPLPEEF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00491 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Trre14g00491 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Trre14g00491 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Trre14g00491 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Trre14g00491 462 FunFam Carboxypeptidase 26 459 - -
Trre14g00491 462 Gene3D - 310 346 - -
Trre14g00491 462 SUPERFAMILY alpha/beta-Hydrolases 35 459 IPR029058 -
Trre14g00491 462 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Trre14g00491 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Trre14g00491 462 Gene3D alpha/beta hydrolase 28 289 IPR029058 -
Trre14g00491 462 FunFam Carboxypeptidase 356 455 - -
Trre14g00491 462 Gene3D - 357 455 - -
Trre14g00491 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 442 IPR001563 GO:0004185|GO:0006508
Trre14g00491 462 Pfam Serine carboxypeptidase 38 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00491 Trre-Chr14 3975009 3978827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00491 318 458 Calmodulin-binding Proteins AT2G22960 29.078 9.16e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00491 K16297 - gmx:100805130 815.453