Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00474 ATGTTTCCTTCTACTTATTGCTCTTTAGGTCCTTACCCTTGTTACAATACTAATTCTTCTTCTTCATCACATTCATACCCTCCTTTTACTTTTCTTACCCCTGATCAAAATGTTTCTTCAAACAACACCACCAACAACAACACCACCAACAACATCAACACTTTTCTTCATGATCCAACTATTTCTATTCCCTACACACAAACAACTCATCATCATCATGTTCCAATTAATCCTGAAACATTAACAAATTGGGCTGTTGCTGACTATGCCGCAATGTTGAAACAAGATCTAAGTGGTTCTTCTCATTATGGTAATTTCTCAAATATGCTTACAAAGAAACCGGTTAAGAAACCGGTGAAGAAAGACCGGCATAGCAAGATTCATACATCTCAAGGTTTGAGAGACAGAAGGGTAAGACTTTCAATTGAGATTGCGCGAAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGTAACACACTTGAATGGCTCTTCAACAAATCAAAAGAGGCAATTGAAGATTTAACAAAAAGCAAAAACAACATAGTTTCAGGTAATGATGATGACGATGATCGTAACTTCTATTCTTCGTCTTCTGATGAAGGAGACGAAGAAGTGAGAAAGATGAAAAGGGCACAAAAAGAATCTTCAAAGATGAAGGAATCAAGGGACAAATCAAGAGCAAGAGCAAGGGAAAGAACAAGTGAGATGATGATGCAAGATTTGAAAGAAAAATACCCTGAAAATATTCAAAATCAACAAATCCTTCATCAATTGATGCCTAATGATGAGGAAAGTTCAAAATCACTTCAAAGAGATGATATCTTTAACTTTATTGAGGAATCAATTGTGATTAAGAGAAAGTTGAAGAAATCTTCTCATCATCAACAACAAAACAATTTGATCCCTAAGGAAACAAGTTTTGATCACAACAGTGACTGTCATGACTCTCCAATGTTATCACCAAATTGGGATGCAAATAATAACAATTCTGCTTCTGGAAGATCCAACTTTTCTGCAATATCAAGAATGAATCTATCATCAGGGCTTCAAATCTTTGGAAAATCATGGGAGGATTGCAATACAAGTCCAAATCGATATTAG 1113 0.3549 MFPSTYCSLGPYPCYNTNSSSSSHSYPPFTFLTPDQNVSSNNTTNNNTTNNINTFLHDPTISIPYTQTTHHHHVPINPETLTNWAVADYAAMLKQDLSGSSHYGNFSNMLTKKPVKKPVKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEDLTKSKNNIVSGNDDDDDRNFYSSSSDEGDEEVRKMKRAQKESSKMKESRDKSRARARERTSEMMMQDLKEKYPENIQNQQILHQLMPNDEESSKSLQRDDIFNFIEESIVIKRKLKKSSHHQQQNNLIPKETSFDHNSDCHDSPMLSPNWDANNNNSASGRSNFSAISRMNLSSGLQIFGKSWEDCNTSPNRY 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00474 370 MobiDBLite consensus disorder prediction 183 239 - -
Trre14g00474 370 MobiDBLite consensus disorder prediction 186 239 - -
Trre14g00474 370 Coils Coil 212 232 - -
Trre14g00474 370 ProSiteProfiles TCP domain profile. 120 178 IPR017887 -
Trre14g00474 370 ProSiteProfiles R domain profile. 223 240 IPR017888 -
Trre14g00474 370 Pfam TCP family transcription factor 119 243 IPR017887 -
Trre14g00474 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 78 334 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00474 Trre-Chr14 3812988 3814180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00474 57 244 TCP Transcription Factor Family AT1G67260 39.171 1.32e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre14g00474 TCP 9.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00474 - - cam:101489716 456.447