Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00472 ATGGATGCGCGTCGAGCTCCACGCGCCGTCATCGACCCTAAAGTTCGCAAGGTCGGGTTCTTCACTCCACCCGACCCGATTCCATTCGAATTTTCCCCTTCCGCCAATTCTCTTTCTCCTGTTATGATCCCTCCGCCGCGTCATTCATCGGAAAATCTCGAACTCAATTCTCGTCCTTCCGTTACTTCTCCTTCCGGCGATGAAACAATTGCTGTCTCCGGTAACTGTAATAGCGTCTTGTCGGAGTTGTTTCCTGCTCCGATGTCGCCGGTACCGTCTCCGAAGATTGGAAATGGAGATGGAGGTGGAATTGTGGCTTCTTCGTTTCCGAGAGGTGGATTTGACTTGACTGTGGTGAAGGCTAGTGGTGGAGTTCCGGTGTGTAAATTGACTACTGTTTCTGTCGTCAATGCTGATTCGTTTGCTATTGATGAAAGAGAGAAACCAAACAAAGGAGGAGGATCCACAGTGGAAGTGAAAGACCAAGCTAAGAATTCAAAACAGAAGAAAGATAAGTCCTCAAAAGCTGAAAGACACGCCCTTCAAGAAGCTCAGCGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGTACTGCGACTTCAGTGAATGTAAAATCAGCTAAAGCTGCCAAGCCCCCACAAAAAGTTGATAATACTTCAGTTGCAGTTTCTGAGAAGAAGGGAGGTGACCGTCCATCAGAGAAGGATAGAAAAAAAGATGTTCCTCACCCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCTAAACGCCGTGCTGTGGTAAACCAAATTGAAGCCAGGAACAGAGTTGAACTATTCAGACATTTGCCACAATACGAACATGGGAGTCAGCTTCCTGATCTTGAGGCAAAGTTTTTCCAGCTTGATCCTGTGCATCCTTCGGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGAAATGCTCGTTGTATTGCTATGCTTCAAGCATTCCAGGATGCCATCAGAGACTACACAGTTCCATCTGAGAAGACTTTAGTGAGAGACTTGACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGCCGACCTCTTTCAATCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCAAATCGCAAAGCTACCTCTGACACTGTCCGAGTCAGAATCAAAATCTTCTCTTCAATCAGATATTGAGAATTTTATATATGAGAAGATTATACTTGCTGACAAGGCGATAGTAGAGCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGGTCATCATCAGCAGTTGAAATGATACTGTTACGTGCACATGAGTTAGGGAAACAGTTCCGAGTTGTAGTAGTAGACTCTCGTCCAAGGCTTAGAGGGAAACTTTTGCTTCGTAGACTAGTGGAGAAAGGTCTCAGTTGTACATACACTCATATCAATGCTGTTTCCTACATAATGCATGAAGTTACCCGAGTTTTTTTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATTCCTTCCATGTCCCTGTTATAGTTTGTTGTGAAGCTTTTAAATTTCATGAAAGGGTTCAGCTTGATTCAATATGCTCAAATGAACTTGGTGATCCAAATGCAATTTCAAAGGTTTCGGGTAGAGGGGATGTTAACCACTTAGATGCTTGGGCCGATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGATCCCCCCGACAAGTGTTCCTGTAGTTGTAAGGAAATATAACAGAGAACAGGTGTGGATATAA 1890 0.4323 MDARRAPRAVIDPKVRKVGFFTPPDPIPFEFSPSANSLSPVMIPPPRHSSENLELNSRPSVTSPSGDETIAVSGNCNSVLSELFPAPMSPVPSPKIGNGDGGGIVASSFPRGGFDLTVVKASGGVPVCKLTTVSVVNADSFAIDEREKPNKGGGSTVEVKDQAKNSKQKKDKSSKAERHALQEAQRAAKAAAKAEGNKASGTATSVNVKSAKAAKPPQKVDNTSVAVSEKKGGDRPSEKDRKKDVPHPRMQYDDKSRVEKAKRRAVVNQIEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIRDYTVPSEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSQIAKLPLTLSESESKSSLQSDIENFIYEKIILADKAIVEHAVTKIRDGDVLLTYGSSSAVEMILLRAHELGKQFRVVVVDSRPRLRGKLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHSFHVPVIVCCEAFKFHERVQLDSICSNELGDPNAISKVSGRGDVNHLDAWADTENLQLLNLIYDATPSDYVSMIVTDYGMIPPTSVPVVVRKYNREQVWI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00472 629 Gene3D - 415 622 IPR042529 -
Trre14g00472 629 MobiDBLite consensus disorder prediction 231 260 - -
Trre14g00472 629 MobiDBLite consensus disorder prediction 40 67 - -
Trre14g00472 629 MobiDBLite consensus disorder prediction 50 67 - -
Trre14g00472 629 Pfam Initiation factor 2 subunit family 320 612 IPR000649 GO:0044237
Trre14g00472 629 MobiDBLite consensus disorder prediction 145 260 - -
Trre14g00472 629 MobiDBLite consensus disorder prediction 162 184 - -
Trre14g00472 629 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 34 626 - -
Trre14g00472 629 SUPERFAMILY NagB/RpiA/CoA transferase-like 277 622 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00472 Trre-Chr14 3794542 3799004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00472 1 629 Eukaryotic Initiation Factors Gene Family AT5G38640 62.784 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00472 K03680 - gmx:100785938 959.903