Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00417 ATGGCTTCAATCACTCTTTCTCCTAATGCTTCCCCTGTTGCATTGCCTCCATCATCTGGTGCTGCTGTTTTATCACCACCACCATCACCTAATACTTCTCAATCCAATCAATCATCTACTTCGCCGCAGGCCCTGCCTGTAACTACTCCTCCTTCTCCGTCTCCTCCGCAGACTGTGCCTGTAACTTCTCCACCTTCTCCTTCCCTTTCTCCTCCTCCACCGTCGAATGCACCACCGCCAACGTCACCACCATCACCTCCTGCATCACCACCTCCTGCACCAGTGGTAACTGCCCCTCCTCCAGCTAAAACTTCACCTTCCGTTCCAAATTTGTCTCCACCACCTCCATCAGCTGGTTCCCCTCCTCCTCAATCATCAAAACCACCTCCTTCTCAATCAATTTCGCCGTCTCCTCCTCCTCCTCCTCCTCCAGCCAATGTACCTAAGCCACCATCTTCCAATCCTCCTCCTGCACCACAAGCAAAGCCGCCAAAAAGTAACACTCCTTCGCCTCCTGCACCACAAGCAAAGCCACCAAAAAGTAACACTCCTTCACCACCTGCACCACAAGCCAAGCCACCAAAAAGTAACACTCCTTCACCTCCTGCACCTCCTCCATCTGTTTCTCAATCTCCTCCTTCCCCTCCCACCGGTGATCCTCCTTCCGCTTCCACTGTTGTTCCACCTCCGTCTACATTGCCATCAACTCCTCCTTCAGTCCCTTCAGGATCTGCATCACCTCCAGCAACCTCTTTGCTTCGTCCTCCTACGAACGAAACAGTACCTGCTGGTGGTCCAAAAGTGTCAATGCCATCTATTCCAACTGAGAAACCAACTGCAAGACCGACTGTTGATGGATCTGGTAATATTGCCACAAACAACGCACCTTCACATTCAGGAGGGTTGAAGACCGGAGGAGCTGTTGCTATTGGCGTCGTAGCTAGTTTAATTGTTCTCAGCCTTGTTGGTATGGCTGTGTGGTTTGTACAGAAAAAGAAGAAGGGAAAAGGACCAAGAGATGATTCTGCTGCACCTTCCCCATTTACCTCGTCTCACAATTCAGGTACATTGTTCTTGAAGCCACAGTCTCAAGCTAATTTTGTAGGGAGTGGCAGCGGTAATGAATATGTGTATTCACCATCAGAGCCAGGTGGAGTAAATAGTTCAAGATCATGGTTCACATATGAAGAACTTACCCAAGCTACAAATGGGTTTTCAGAGCAGAATAAATTGGGCGAAGGTGGATTCGGTTGTGTCTACAAAGGTTTGCTTACAGATGGAAGAGAAGTAGCTGTGAAACAGCTTAAAATTGGTGGTGGGCAAGGGGAACGTGAATTTAGAGCAGAAGTTGAGACTATTAGTCGAGTACATCATCGTCATCTGGTTTCTTTGGTTGGTTACTGTATATCTGAGCATCAAAGATTGCTTGTCTATGACTATGTTCCCAACAATACTCTTCATTACCATCTACATGATGATAAAGCACCTGTTTTGGACTGGTCCATCAGAGTTAAGGTTGCTGCTGGTGCAGCTCGTGGGATAGCTTACCTACATGAAGATTGCCATCCGCGCATTATTCATCGAGATATTAAATCATCAAACATCCTTCTCGATCACAACTTTGAAGCTCTTGTTTCAGATTTTGGTCTTGCGAAATTAGCGTTGGATTCAAACACACATGTAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATACGCGACAAGTGGGAAATTAACTGATAAGTCTGATGTATATTCCTTCGGTGTTGTGCTTTTGGAGCTAATTACAGGTCGAAAGCCCGTAGATGACTCTCAGCCAATTGGTGATGAGAGCCTTGTTGAATGGGCTCGGCCTCTGTTGATTGAAGCCCTCGAGAAAGAGGACTTTGAAATTTTGGCGGATCCAAGACTAGGAAAGAACTACAATAGAAATGAAATGTTTAGGATGATTGAGGCTGCCGCAGCTTGCGTGCGTCACTCCTCGGTTAAGAGGCCACGGATGAATCAGGTTATGAGAGCTTTTGATTCCGTGGACGAGTCTGCAGATCTGAATAATGGAATGAAACCAGGACAGAGTTCAGTGTTCGATTCTGCACAGCAATCTGCACAGATAAGAATGTTTAGGAGAATGGCTTTTGGAAGCCAAGATAGTTCCAGTATCTATAATGAGTCTCAAAGTAGCTATAGAAGTAGAGACCAGGACTCTACAACTATGTTCCCCCAAAATCAATCGCGGCCTTGGAACGTTCGAGATGACTCTTTATAG 2277 0.4664 MASITLSPNASPVALPPSSGAAVLSPPPSPNTSQSNQSSTSPQALPVTTPPSPSPPQTVPVTSPPSPSLSPPPPSNAPPPTSPPSPPASPPPAPVVTAPPPAKTSPSVPNLSPPPPSAGSPPPQSSKPPPSQSISPSPPPPPPPANVPKPPSSNPPPAPQAKPPKSNTPSPPAPQAKPPKSNTPSPPAPQAKPPKSNTPSPPAPPPSVSQSPPSPPTGDPPSASTVVPPPSTLPSTPPSVPSGSASPPATSLLRPPTNETVPAGGPKVSMPSIPTEKPTARPTVDGSGNIATNNAPSHSGGLKTGGAVAIGVVASLIVLSLVGMAVWFVQKKKKGKGPRDDSAAPSPFTSSHNSGTLFLKPQSQANFVGSGSGNEYVYSPSEPGGVNSSRSWFTYEELTQATNGFSEQNKLGEGGFGCVYKGLLTDGREVAVKQLKIGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHDDKAPVLDWSIRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEALVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTDKSDVYSFGVVLLELITGRKPVDDSQPIGDESLVEWARPLLIEALEKEDFEILADPRLGKNYNRNEMFRMIEAAAACVRHSSVKRPRMNQVMRAFDSVDESADLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSIYNESQSSYRSRDQDSTTMFPQNQSRPWNVRDDSL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00417 758 MobiDBLite consensus disorder prediction 720 758 - -
Trre14g00417 758 ProSitePatterns Protein kinases ATP-binding region signature. 411 433 IPR017441 GO:0005524
Trre14g00417 758 Gene3D Phosphorylase Kinase; domain 1 380 480 - -
Trre14g00417 758 MobiDBLite consensus disorder prediction 332 355 - -
Trre14g00417 758 MobiDBLite consensus disorder prediction 285 300 - -
Trre14g00417 758 ProSiteProfiles Protein kinase domain profile. 405 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00417 758 SUPERFAMILY Protein kinase-like (PK-like) 383 676 IPR011009 -
Trre14g00417 758 MobiDBLite consensus disorder prediction 46 244 - -
Trre14g00417 758 FunFam Proline-rich receptor-like protein kinase PERK8 377 480 - -
Trre14g00417 758 Gene3D Transferase(Phosphotransferase) domain 1 481 702 - -
Trre14g00417 758 MobiDBLite consensus disorder prediction 1 300 - -
Trre14g00417 758 CDD STKc_IRAK 411 676 - -
Trre14g00417 758 Pfam Protein tyrosine and serine/threonine kinase 408 676 IPR001245 GO:0004672|GO:0006468
Trre14g00417 758 FunFam proline-rich receptor-like protein kinase PERK8 481 693 - -
Trre14g00417 758 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 316 726 IPR047117 -
Trre14g00417 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Trre14g00417 758 SMART serkin_6 405 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00417 758 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00417 Trre-Chr14 3414683 3419696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00417 276 737 Trihelix Transcription Factor Family AT5G38560 67.511 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Trre14g00417 PK_Tyr_Ser-Thr 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00417 - - gmx:100784873 841.647