Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00382 ATGCAAACCAAAGAGATAAATACAGGACTCAATTATTTACTCCCAAATTCAAATCCATCTCCTTATCCATCATGTAACTACAACATGATCCAAAACACCATTCCAAATCCTCAACTTCAAAATTACTCAAATCAATTCTATGGTTTCAACCAAAACCCTCTACAAATTCTTCAAGACTTCAGTTCACAATCCTCATGCCTAAGCAGCAACTCAACTTCGGACGAAGCGGACGAACAAAATAAAGGACTAATCAACGAAAGAAAACACCGAAGAATGATATCAAACCGCGAGTCAGCGCGCAGGTCACGAATGAGGAAACAAAAACAACTTGATGAGCTTTGGTCACAAGTTGTTTGGCTAAGGAATGAGAATCAGCAACTATTAGATAAGCTTAATAATTTCTCAGAAACTCATGATAGAGTTGTTCAAGAGAATGTTCAATTGAAAGAAGAAGCTTCGGAACTTCGACAAATGATTCAAAAAGACTATCATGATTTCAATACAGAAAATAATTTAAAAGGACTTGGGGGAGAAAGTCCTCAATTTTCATCTAAATCTACTCTAACTTTAATTTTCAGGAAGTAA 585 0.3556 MQTKEINTGLNYLLPNSNPSPYPSCNYNMIQNTIPNPQLQNYSNQFYGFNQNPLQILQDFSSQSSCLSSNSTSDEADEQNKGLINERKHRRMISNRESARRSRMRKQKQLDELWSQVVWLRNENQQLLDKLNNFSETHDRVVQENVQLKEEASELRQMIQKDYHDFNTENNLKGLGGESPQFSSKSTLTLIFRK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00382 194 CDD bZIP_plant_GBF1 88 139 IPR045314 GO:0003700|GO:0006355
Trre14g00382 194 FunFam BZIP transcription factor 85 136 - -
Trre14g00382 194 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 164 IPR044521 -
Trre14g00382 194 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
Trre14g00382 194 SUPERFAMILY Leucine zipper domain 87 136 IPR046347 GO:0003700|GO:0006355
Trre14g00382 194 Gene3D - 85 140 - -
Trre14g00382 194 Pfam bZIP transcription factor 87 137 IPR004827 GO:0003700|GO:0006355
Trre14g00382 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Trre14g00382 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 90 105 IPR004827 GO:0003700|GO:0006355
Trre14g00382 194 MobiDBLite consensus disorder prediction 66 85 - -
Trre14g00382 194 Coils Coil 131 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00382 Trre-Chr14 3086429 3092572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00382 11 159 bZIP Transcription Factor Family AT3G30530 60.526 3.44e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g00382 bZIP_1 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00382 - - aprc:113867865 217.624