LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g00377	ATGACAATTGGAAATCTTGCACCTAAGACAGAGAAGAAGAAATCATCAAGAAAAAACAAGAACAAGGCTGTTGTTGTAAGTGAAAATGCACCTTTGTTGCCTAAAAGTCAAGCCCATGAAAGTGATTCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGGCAACTACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACCTTGAAACAGTTGGGGTTGATTCCTGGTCTTGCTGCTATACTCATCATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCACAAATTTGTGTTATTGTTAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCTTCAAGTGGAGAACATCACTATGGTATCCTTGAAGGATGGTTTGGCGTGCACTGGTGGACAGGACGGACATTTATCGTCCTTCTTACGACGGTTTGTGTATTTGCACCCCTCGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCCCTTTCCGTTGCACTGGCGGTAGTTTTTCTTGTCATTGCTGTGGGAATTTCTGTTGTCAAGATTATAAGTGGAGGCATTACCATGCCTAGACTCTTTCCAGCTGTTACTGATGCAACATCAATCTTTAACCTATTCACTGTGGTTCCTGTGTTTGTGACTGCTTATATCTGCCACTACAATGTTCACAGCATAGATAATGAGCTCGAGGACAACTCACAGATGCAAGGCGTTGTACGTACTGCCCTCGGTCTATGCTCATCTGTGTACTTAATGATAAGCTTCTTTGGCTTCCTTCTATTCGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATGCCGATCTTGGAATTCCTTTTGGTTCTTTGCTCAATGATGCTGTTCGTATTAGCTACGCTGCACACCTCATGCTTGTATTTCCGGTTGTCTTTTTTCCATTGCGACTCAATATAGATGGTCTTCTCTTCCCTAAGTCAAGACCTTTGGTTCTAGATAACTTCAGATTTGCATCAATGACTGTTGCGCTTATCGGTGTTATCTTCCTTGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACTGCTGCAGTTTGTATAGGATTCATCTTTCCAGCTGCCATCACGCTTAAGGACCGCTACAACATAGCGACTAAATCGGACAAGATTCTATGTGTTGTTTTGATAATCCTAGCAGTCTTCTCAAACATTGTGGCTATATATAGTGACGCCTATGCATTGATCAAGCAGAACAAAACTAAACGGGAATGA	1410	0.4128	MTIGNLAPKTEKKKSSRKNKNKAVVVSENAPLLPKSQAHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLAAILIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSSSGEHHYGILEGWFGVHWWTGRTFIVLLTTVCVFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISVVKIISGGITMPRLFPAVTDATSIFNLFTVVPVFVTAYICHYNVHSIDNELEDNSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDADLGIPFGSLLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFPKSRPLVLDNFRFASMTVALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATKSDKILCVVLIILAVFSNIVAIYSDAYALIKQNKTKRE	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g00377	469	PANTHER	AMINO ACID TRANSPORTER	43	448	-	-
	Trre14g00377	469	MobiDBLite	consensus disorder prediction	1	23	-	-
	Trre14g00377	469	Pfam	Transmembrane amino acid transporter protein	51	455	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g00377	Trre-Chr14	3031280	3034546	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g00377	3	468	Amino Acid or Auxin Permease AAAP Family	AT3G30390	68.026	0.0	641

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g00377	K14207		-	gmx:100796345	777.704